| Protein name |
Phage protein
|
| Main knot |
81 (63%)
|
| Global pLDDT |
85.25
|
| Species |
Paenibacillus pabuli
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A855XQ80
|
| PDB structures |
-
|
| Model length |
271
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
84.5 | 28-242 | 215 | 1-27, 243-271 | 27 | 29 |
|
Model Sequence |
MYLDRLQLFIQSGQYTELKKLENELSCLRDRIMKYQEIAGLERIVWRKQGVVGYFTRVHLYEEDKAALFDFFHNSGLLPYVVNVQWAKLLPDEQLKLEELVAKREGYVRFWPKKTKFLFAKESNYDLAKPLQADILDLVSEWRVLKWKYERVEKQWTTLRREALREWGERERKIQLPSGSLSVVRLKPQIQAGTLLKHLDRSALLRAGTVNYDKVIEFAAKGYFNKVDVDKYRKIKDISIRYILMELQNEIKKHEYFNRRLNCLSEMSRQM
|
| Protein name |
Phage protein
|
| Main knot |
81 (57%)
|
| Global pLDDT |
85.86
|
| Species |
Paenibacillus pabuli
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
271
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
90.6 | 31-242 | 212 | 1-30, 243-271 | 30 | 29 |
|
Model Sequence |
MYLDRLQLFIQSGQYTELKKLENELSCLRDRIMKYQEIAGLERIVWRKQGVVGYFTRVHLYEEDKAALFDFFHNSGLLPYVVNVQWAKLLPDEQLKLEELVAKREGYVRFWPKKTKFLFAKESNYDLAKPLQADILDLVSEWRVLKWKYERVEKQWTTLRREALREWGERERKIQLPSGSLSVVRLKPQIQAGTLLKHLDRSALLRAGTVNYDKVIEFAAKGYFNKVDVDKYRKIKDISIRYILMELQNEIKKHEYFNRRLNCLSEMSRQM
|
| Domain |
Bacteria
|
| Family |
Paenibacillaceae
|
| Species (Full Name) |
Paenibacillus pabuli
|
| Gene |
DET56_12260
|
| PDB structures (whole Protein) |
-
|
A0A855XQ80