| Protein name |
Serine protease
|
| Main knot |
52 (44%)
|
| Global pLDDT |
74.3
|
| Species |
Pseudomonas testosteroni
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
 A0A8B4S7L1
|
| PDB structures |
-
|
| Model length |
298
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
72.51 | 97-243 | 147 | 1-96, 244-298 | 96 | 55 | Knot |
Model Sequence |
MLSVRIEPPVPGFLLSRGRLLRASLLCAAAMVAAAPASAWTRGNHKLAQISIVERATGRVLPQYSHEGALWVVGRPGANYAVRIRNLESRRIMGVISVDGVNAINGRTASSRAEGGYVLDAGDSYDVRGWRKSNDNVAAFYFSESDMSYAARTGRPQDVGVIGVALYREKLPEPARYQGPVYESDAASAASAAESAAADSAMPQAASKSRSAERRAPRASPAPSLGTGHGAVERSQVTQVEFEADTDQPRQMVRICYDSYANLVARGVIREPRPRPPQPRAPNPFPGDNGFVPDPPRN
|
| Protein name |
Serine protease
|
| Main knot |
52 (47%)
|
| Global pLDDT |
75.3
|
| Species |
Pseudomonas testosteroni
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A8B4S7L1
|
| PDB structures |
-
|
| Model length |
298
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
73.7 | 4-250 | 247 | 1-3, 251-298 | 3 | 48 |
Model Sequence |
MLSVRIEPPVPGFLLSRGRLLRASLLCAAAMVAAAPASAWTRGNHKLAQISIVERATGRVLPQYSHEGALWVVGRPGANYAVRIRNLESRRIMGVISVDGVNAINGRTASSRAEGGYVLDAGDSYDVRGWRKSNDNVAAFYFSESDMSYAARTGRPQDVGVIGVALYREKLPEPARYQGPVYESDAASAASAAESAAADSAMPQAASKSRSAERRAPRASPAPSLGTGHGAVERSQVTQVEFEADTDQPRQMVRICYDSYANLVARGVIREPRPRPPQPRAPNPFPGDNGFVPDPPRN
|
| Protein name |
Serine protease
|
| Main knot |
945 (49%)
|
| Global pLDDT |
82.16
|
| Species |
Pseudomonas testosteroni
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
298
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
69.7 | 4-252 | 249 | 1-3, 253-298 | 3 | 46 |
Model Sequence |
MLSVRIEPPVPGFLLSRGRLLRASLLCAAAMVAAAPASAWTRGNHKLAQISIVERATGRVLPQYSHEGALWVVGRPGANYAVRIRNLESRRIMGVISVDGVNAINGRTASSRAEGGYVLDAGDSYDVRGWRKSNDNVAAFYFSESDMSYAARTGRPQDVGVIGVALYREKLPEPARYQGPVYESDAASAASAAESAAADSAMPQAASKSRSAERRAPRASPAPSLGTGHGAVERSQVTQVEFEADTDQPRQMVRICYDSYANLVARGVIREPRPRPPQPRAPNPFPGDNGFVPDPPRN
|
| Domain |
Bacteria
|
| Family |
Comamonadaceae
|
| Species (Full Name) |
Comamonas testosteroni (Pseudomonas testosteroni)
|
| Gene |
NCTC10698_03348
|
| PDB structures (whole Protein) |
-
|
A0A8B4S7L1