A0A8B6GPE1 | AlphaKnot 2.0

AF4

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Information

Protein name	Short-chain collagen C4-like
Main knot	3₁ (90%)
Global pLDDT	72.17
Species	Mediterranean mussel
UniProt	A0A8B6GPE1
Structure Prediction Model	AlphaFold v4: A0A8B6GPE1
PDB structures	-
Structure in AlphaLasso	A0A8B6GPE1: LS_3+--N L_-1N L_+2N L_+1N
Model length	373
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					62.7	216-259	44	1-215, 260-373	215	114

Model Sequence

MAIIVALQLILYFGTCLMEGIGETNEIHGSKRLLLNDPDAINNRLNNLERSLQQQQAAMLQQQATILQQQATIQQLKQNIPQGYTAGQLYYDASSYPNRFGGPSNMLCLPNNPKLSNKTASHSFIYGTEFEENFLRNDAANEDIPCALCRSINTTSTVMFPGRNICYNGWKTEYEGYVMSGHWGYRASSYICVDLHPDYIPGGKANTNGQLLYVTGYTAGQEHYSSSYSNRFGGAANMFCLPNNPKLSNKTAPGYSFLYRTEFEENFLRSDAVNEDIPCAFCTSLYTTSSAMFPGRNVCYHGWKMEYEGYVMSGYWGHRASSYICVDAHPDYVPCGKANTGGQLLYVTGTKCGTPTCPPYHDNVAVKCVVCSK

Comments

ESM1

Categories voted by users:

Information

Protein name	Short-chain collagen C4-like
Main knot	5₁ (55%)
Global pLDDT	61.46
Species	Mediterranean mussel
UniProt	A0A8B6GPE1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A8B6GPE1: LS_3+--N L_-1N L_+2N L_+1N
Model length	373
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					66.7	87-372	286	1-86, 373-373	86	1

Model Sequence

Comments

Domain	Eukaryota
Family	Mytilidae
Species (Full Name)	Mytilus galloprovincialis (Mediterranean mussel)
Gene	MGAL_10B046489
PDB structures (whole Protein)	-

A0A8B6GPE1F1

AF4

Model Sequence

ESM1

Model Sequence