A1L2E4F1

rRNA methyltransferase 3B, mitochondrial
AF4
Categories voted by users:
Information
Protein name
rRNA methyltransferase 3B, mitochondrial
Main knot
31 (89%)
Global pLDDT
70.55
Species
Danre
UniProt
Structure Prediction Model
AlphaFold v4:  A1L2E4
PDB structures
-
Model length
445
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
64.3 306-409 104 1-305, 410-445 305 36
Model Sequence
MATRIASMRFRCALFQSALTLGRNEVNIKRYVRRRRAVSGVVSVNEPTEISEGVISQTSERSSQHNNDITRNTDKSSIENPVSPNNSQPVQFSHINRQKVINLTSRTRFGEVDGLLYEKLHPGDKSLAKLARIAGSKKLREHQVVLEGKHLVCSALDAGAEAQTLYFSSVDALRELPLDKLRQTNVVKVKMEDAQVWSELDTSQEIIAIFKRPEASRLTFSEEKYGRAVPLTLICDTVRDPGNLGSVLRSAAAAGCHSVLLTKGCVDIWELKVLRAAMGAHFRLPIIPNLTWTDISNHLPKTSTVHVADNHSTTMGKHNDNTTPQKHRRPSDYGWVKGHQYQSKAHDDDDANDLCSLEDYCDENSKSLETQLYYTDWVAGHTSLIIGGETHGLSREALQLAERTSGRRLLIPMVDGVDSLNSAIAAGVLLFEGRKQLLSLEKIRV
Comments
AF1-Unassigned
Categories voted by users:
Information
Protein name
rRNA methyltransferase 3B, mitochondrial
Main knot
31 (89%)
Knot fingerprint
K 31
Global pLDDT
70.55
Species
Danre
UniProt
Structure Prediction Model
AlphaFold v1:  A1L2E4
PDB structures
-
Model length
445
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
65.7 306-406 101 1-305, 407-445 305 39
Model Sequence
MATRIASMRFRCALFQSALTLGRNEVNIKRYVRRRRAVSGVVSVNEPTEISEGVISQTSERSSQHNNDITRNTDKSSIENPVSPNNSQPVQFSHINRQKVINLTSRTRFGEVDGLLYEKLHPGDKSLAKLARIAGSKKLREHQVVLEGKHLVCSALDAGAEAQTLYFSSVDALRELPLDKLRQTNVVKVKMEDAQVWSELDTSQEIIAIFKRPEASRLTFSEEKYGRAVPLTLICDTVRDPGNLGSVLRSAAAAGCHSVLLTKGCVDIWELKVLRAAMGAHFRLPIIPNLTWTDISNHLPKTSTVHVADNHSTTMGKHNDNTTPQKHRRPSDYGWVKGHQYQSKAHDDDDANDLCSLEDYCDENSKSLETQLYYTDWVAGHTSLIIGGETHGLSREALQLAERTSGRRLLIPMVDGVDSLNSAIAAGVLLFEGRKQLLSLEKIRV
Comments
Domain Eukaryota
Family Danionidae
Species (Full Name) Danio rerio
PFAM codes  PF00588
InterPro codes  IPR001537,  IPR013123,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
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