A1VTS3F1

Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC 1.17.4.1)
AF4
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Information
Protein name
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC 1.17.4.1)
Main knot
Unknown (54%)
Global pLDDT
81.74
Species
strain CJ2
UniProt
Structure Prediction Model
AlphaFold v4:  A1VTS3
PDB structures
-
Structure in AlphaLasso
  A1VTS3: L0
Model length
1184
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
82.1 108-1128 1021 1-107, 1129-1184 107 56
Model Sequence
MKREHFGRPQDLTATQPISHDVLKEKYLKPGESGVEDVYRRVARALASVELPAEREKHEALFLENLHAGAIGAGRIMSAAGTAIQATLINCFVQPVGDCIQGVDDGGYPGIYEALREAAETMRRGGGVGYDFSRIRPRGAEVKATASMASGPCSYINVFDQSCSTVESAGARRGAQMGVLRIDHPDVHEFITAKRTPGRWNNFNVSVGMSDGFMQALNDDQPWELVHKAKPGAALMAKGAFQRADGLWVYQTVAAREMWDTVMRSAYDFAEPGILFLDNINTDNNLRYCEAIAATNPCVTADTRLATQHGLVPIGWLQANGGALDCTVDRRALGEDRRGTVTRAAVPAFLSAGQAEVFKVTTAEGYQIKATAWHEFYTARGKLKLSELKAGDELWVQSGKGQFGAQGSGALGLLIGLITGDGHFTNRGKDEQAAVISLWGEERQLADDIAGSVNALIAGTSLAPRDYLVKPVAVAERNMVFIRSTMLVRVLDGYGFNGETKLEVPEVVWRGSEACMRGYLQGLFQTDGTVNVSSNSQSCSVRLSSSHRPLLQDVQVLLANFGVFSRIHERREAGPRSLPDGQGGQRDYLCQTQHELIVDGESREAFMREIGFLLPAKREKYDAWVADKALVKTQRFAATITAIEPAGVEPVYDTTQPDGNTVIFNGLVTGQCGEQPLPPYGCCDLGPIILTRFVRHPFGFGGEPEFDFEAFEASVATQVRALDNVLEVTFWPLPQQQTESSAKRRIGVGFTGLGNALAMLRLRYDAPEGRDMAARIAVRMRDAAYAASSELAKEKGAFPKFDANGYLATGTFASRLPAALQQAIRAHGIRNSHLLSIAPTGTVSLAFADNASNGIEPAFSWMYKRKKRESDGSTTEYAVEDHAWRLYRELGGDVNKLPGYFVSALDMSATSHIAMMQAVQPFIDTAISKTVNVPADYPYGDFKSLYHQAWRAGLKGLATYRPNAILGAVLETHASPDATPAAAAPAPMDPMRTVIESRPKGALSAVAEKVEYWTQEGHKTLYIVVSFLPVPSASGSGTVERAIEFFMPVGQSGESQQWITSSMRMLSLAARGGFLERALSDMRKVAWDRGPVRLGTYEKADGTRVPLWHDSEVAAIAYAVQNIIARRAAQSALSLAPAEPVQVASSLAPPVMAGKKCSECGAHAVIRKDGCDYCTQCGHLGTCG
Comments
Domain Bacteria
Family Comamonadaceae
Species (Full Name) Polaromonas naphthalenivorans (strain CJ2)
Gene Pnap_3755
PFAM codes  PF02867,  PF14528
InterPro codes  IPR000788,  IPR003587,  IPR004042,  IPR004860,  IPR006141,  IPR006142,  IPR027434,  IPR036844
PDB structures (whole Protein) -