| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
81.1 | 117-217 | 101 | 1-116, 218-395 | 116 | 178 |
|
Model Sequence |
MAVVDDTGKECFIRFNRSSDYPLKNLNSKDACKHLRWLLLNPEATRSFNSIYDKLQQDENSGWNFNFEPPPLKSWRFKLAGEYDESDPRLFYVEEIKIVYSSSFNYGKKVSIFHPKKIDVIPIEPSNGKRPEINRTDPDPQLDFEATPGSHRKRDTFSEEGFRFVCNTEDEVTVSPGKALSRVAPNVNTTEEPKRDTSGVGHGTATGSAQELDWAINRSDCDDPTRPETPKVVAPTGNFQIFEKVIKKLMKLPDYEHKGTQCLAMPKPDNSSLIYKNKLTQEARTFHCAYFYYRQTPLVIIEVDISDINDKHSLGSRLFGFSESSKDGLTHVMKACSEKGVRWDAKANQEHCSVVVEIKHPSRTKKIEGETVLRTESEYETAWIEALHRAVKRVT
|
| Protein name |
TnsE_C domain-containing protein
|
| Main knot |
01 (93%)
|
| Species |
strain SWAT-3
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
395
|
| ESM generation time |
2023-06-22: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MAVVDDTGKECFIRFNRSSDYPLKNLNSKDACKHLRWLLLNPEATRSFNSIYDKLQQDENSGWNFNFEPPPLKSWRFKLAGEYDESDPRLFYVEEIKIVYSSSFNYGKKVSIFHPKKIDVIPIEPSNGKRPEINRTDPDPQLDFEATPGSHRKRDTFSEEGFRFVCNTEDEVTVSPGKALSRVAPNVNTTEEPKRDTSGVGHGTATGSAQELDWAINRSDCDDPTRPETPKVVAPTGNFQIFEKVIKKLMKLPDYEHKGTQCLAMPKPDNSSLIYKNKLTQEARTFHCAYFYYRQTPLVIIEVDISDINDKHSLGSRLFGFSESSKDGLTHVMKACSEKGVRWDAKANQEHCSVVVEIKHPSRTKKIEGETVLRTESEYETAWIEALHRAVKRVT
|
| Domain |
Bacteria
|
| Family |
unclassified Vibrionales
|
| Species (Full Name) |
Vibrionales bacterium (strain SWAT-3)
|
| Gene |
VSWAT3_09713 VSWAT3_24459
|
| PDB structures (whole Protein) |
-
|
A5KZZ8
A5KZZ8