| Protein name |
tRNA_int_endo_N domain-containing protein
|
| Main knot |
31 (47%)
|
| Global pLDDT |
97.15
|
| Species |
Pseudoflavonifractor capillosus
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A6P227
|
| PDB structures |
-
|
| Model length |
167
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
97.3 | 4-104 | 101 | 1-3, 105-167 | 3 | 63 |
|
Model Sequence |
MMELGLTFPLQRFLKVKTPAYGTEPDRCFCWDLHVIDLRGCRCLLAVHCHSRYTFVRYDVSSLQWKDIPGLFREGLFDSLTAAGFAPNQVEEYLYQAGCVEITRTHGRREVAFLNRAWEDVLALNLCLDTASQVQPLLDHAVNTHPSRCVGFEGLGMGLERITASLK
|
| Protein name |
tRNA_int_endo_N domain-containing protein
|
| Main knot |
31 (51%)
|
| Global pLDDT |
75.92
|
| Species |
Pseudoflavonifractor capillosus
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
167
|
| ESM generation time |
2023-06-22: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
87.2 | 4-104 | 101 | 1-3, 105-167 | 3 | 63 |
|
Model Sequence |
MMELGLTFPLQRFLKVKTPAYGTEPDRCFCWDLHVIDLRGCRCLLAVHCHSRYTFVRYDVSSLQWKDIPGLFREGLFDSLTAAGFAPNQVEEYLYQAGCVEITRTHGRREVAFLNRAWEDVLALNLCLDTASQVQPLLDHAVNTHPSRCVGFEGLGMGLERITASLK
|
| Domain |
Bacteria
|
| Family |
Oscillospiraceae
|
| Species (Full Name) |
Pseudoflavonifractor capillosus ATCC 29799
|
| Gene |
BACCAP_04556
|
| PDB structures (whole Protein) |
-
|
A6P227