A9EAN5 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	23S rRNA methyltransferase
Main knot	3₁ (79%)
Global pLDDT	94.1
Species	Kordia algicida
UniProt	A9EAN5
Structure Prediction Model	AlphaFold v4: A9EAN5
PDB structures	-
Model length	268
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.7	196-237	42	1-195, 238-268	195	31

Model Sequence

MYKQISSTQNTTIKHILQLQEKSRSRKKEGKCILEGFRELTLALEGNYAIDTLLFYPEICSYERIQELLATAKNTPECIEISKEVYQKIAYRGSTEGVLAIIQTKEHSLKTITFHNKTPLILVAEAPEKPGNIGALLRTADAANIDAVFIANPKTDLYNPNIVRSSVGCVFTTQIAMGSTAEIISFLQEKDIAIYCAALTASEHYHLQNYQKATAIVVGTEATGLSDEWLNNSTQNIIIPMQGKIDSMNVSVAAAIVIFEAKRQRSFL

Comments

ESM1

Categories voted by users:

Information

Protein name	23S rRNA methyltransferase
Main knot	3₁ (79%)
Global pLDDT	95.51
Species	Kordia algicida
UniProt	A9EAN5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	268
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.2	35-118	84	1-34, 119-268	34	150

Model Sequence

Comments

Domain	Bacteria
Family	Flavobacteriaceae
Species (Full Name)	Kordia algicida OT-1
Gene	KAOT1_10171
PFAM codes	PF00588
InterPro codes	IPR001537, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A9EAN5F1

AF4

Model Sequence

ESM1

Model Sequence