B0CCD7F1

tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
AF4
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Information
Protein name
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
Main knot
31 (85%)
Global pLDDT
89.08
Species
strain MBIC 11017
UniProt
Structure Prediction Model
AlphaFold v4:  B0CCD7
PDB structures
-
Model length
250
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.5 83-133 51 1-82, 134-250 82 117
Model Sequence
MSEPRLASIKIVLVEPAGPLNVGSIARVMKNMGLGQLVLVKPHCNPLGPEAKQMSVHAVDVLYQAKTVQTLSEALVGCQRVVATTARQRRLQVVTQAPKQILPWILEGEAALIFGPEDRGLSNEELYHAQAFLQIPTSSDYAALNLAQAVTICCYELRQCLLMGLDNRPTEPRIAESDHLQVELAPFQQMEAFYQALEVALLDIGYLHPHTATARMQKLRQLFNRSQLSTQELAMLRGMIRQVHWKTQAN
Comments
ESM1
Categories voted by users:
Information
Protein name
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
Main knot
31 (87%)
Global pLDDT
89.77
Species
strain MBIC 11017
UniProt
Structure Prediction Model
PDB structures
-
Model length
250
ESM generation time
AlphaKnot deposition date
2023-06-28
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Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
98.5 83-133 51 1-82, 134-250 82 117
Model Sequence
MSEPRLASIKIVLVEPAGPLNVGSIARVMKNMGLGQLVLVKPHCNPLGPEAKQMSVHAVDVLYQAKTVQTLSEALVGCQRVVATTARQRRLQVVTQAPKQILPWILEGEAALIFGPEDRGLSNEELYHAQAFLQIPTSSDYAALNLAQAVTICCYELRQCLLMGLDNRPTEPRIAESDHLQVELAPFQQMEAFYQALEVALLDIGYLHPHTATARMQKLRQLFNRSQLSTQELAMLRGMIRQVHWKTQAN
Comments
Domain Bacteria
Family Acaryochloridaceae
Species (Full Name) Acaryochloris marina (strain MBIC 11017)
Gene trmJ AM1_1801
PFAM codes  PF00588
InterPro codes  IPR001537,  IPR004384,  IPR029026,  IPR029028
PDB structures (whole Protein) -