B0RCR8F1

Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
AF4
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Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (74%)
Global pLDDT
92.29
Species
Corynebacterium sepedonicum
UniProt
Structure Prediction Model
AlphaFold v4:  B0RCR8
PDB structures
-
Model length
233
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.9 151-206 56 1-150, 207-233 150 27
Model Sequence
MLAGQEARHAVTVSRVRSGEGILVGDGRGTIASGTVTSAEPQRLELRVDAVEAHPEPSPRVVLVQALAKGDRDELAVQAATELGVDAVIPWQAQRSVSRWEGQKVAKGRDRWRAIVREAAKQSIRPRVPEVEPLATTKDLVRMAATFRVLVLVLDPTAEARLSRLDLAAADGDADAATDVLLVVGPEGGISPAEVEALREAGAIPVALGSGILRTSTAGPAALALVNAGLGRW
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (77%)
Global pLDDT
94.66
Species
Corynebacterium sepedonicum
UniProt
Structure Prediction Model
PDB structures
-
Model length
233
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.0 151-206 56 1-150, 207-233 150 27
Model Sequence
MLAGQEARHAVTVSRVRSGEGILVGDGRGTIASGTVTSAEPQRLELRVDAVEAHPEPSPRVVLVQALAKGDRDELAVQAATELGVDAVIPWQAQRSVSRWEGQKVAKGRDRWRAIVREAAKQSIRPRVPEVEPLATTKDLVRMAATFRVLVLVLDPTAEARLSRLDLAAADGDADAATDVLLVVGPEGGISPAEVEALREAGAIPVALGSGILRTSTAGPAALALVNAGLGRW
Comments
Domain Bacteria
Family Microbacteriaceae
Species (Full Name) Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum)
Gene CMS1737
PFAM codes  PF04452
InterPro codes  IPR006700,  IPR015947,  IPR029026,  IPR029028,  IPR046886,  IPR046887
PDB structures (whole Protein) -
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