B4FIE9F1

S-adenosylmethionine synthase
AF4
Categories voted by users:
Information
Protein name
S-adenosylmethionine synthase
Main knot
31 (78%)
Global pLDDT
97.34
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v4:  B4FIE9
PDB structures
-
Model length
394
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
98.0 14-273 260 1-13, 274-394 13 121
Model Sequence
MAAESFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCREIGFTSDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYVNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCLVQVSYAIGVPEPLSVFVNSYGTGTIPDKEILKIVKENFDFRPGMISINLDLKKGGNRFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
S-adenosylmethionine synthase
Main knot
31 (74%)
Knot fingerprint
K 31
Global pLDDT
97.34
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v1:  B4FIE9
PDB structures
-
Model length
394
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
97.9 14-272 259 1-13, 273-394 13 122
Model Sequence
MAAESFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCREIGFTSDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYVNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCLVQVSYAIGVPEPLSVFVNSYGTGTIPDKEILKIVKENFDFRPGMISINLDLKKGGNRFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA
Comments
ESM1
Categories voted by users:
Information
Protein name
S-adenosylmethionine synthase
Main knot
31 (75%)
Global pLDDT
84.9
Species
Maize
UniProt
Structure Prediction Model
PDB structures
-
Model length
394
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.6 14-280 267 1-13, 281-394 13 114
Model Sequence
MAAESFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCREIGFTSDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYVNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCLVQVSYAIGVPEPLSVFVNSYGTGTIPDKEILKIVKENFDFRPGMISINLDLKKGGNRFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Zea mays
PFAM codes  PF00438,  PF02772,  PF02773
InterPro codes  IPR002133,  IPR022628,  IPR022629,  IPR022630,  IPR022631,  IPR022636
PDB structures (whole Protein) -
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