B4FWD2F1

Signal peptide peptidase-like 2B
AF4
Categories voted by users:
Information
Protein name
Signal peptide peptidase-like 2B
Main knot
51 (73%)
Global pLDDT
83.73
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v4:  B4FWD2
PDB structures
-
Model length
536
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.6 15-433 419 1-14, 434-536 14 103
Model Sequence
MAAAAVLVVLTVSALAGAAAGGDIVHHDDEAPKIPGCSNDFILVKVQSWVNGKEGGEFVGVGARFGPKIVSKEKHANRTKLTLADPMDCCSPPKHKVPGDVLLVQRGKCKFTKKAKFAEAAGASAIVIINHVHELYKMVCEKNETDLDINIPAVLLPKDAGSALHTLLTNGNTVSVQLYSPDRPVVDTAEVFLWLMAVGTVLGASYWSAWSAREAVIEQEKLLKDGHEDLLNVEARGSSGMVDINVASAIMFVVVASCFLIMLYKLMSYWFVELLVVIFCIGGVEGLQTCLVALLSRWFKPAAESFVKVPFLGAVSHLTLAVCPFCVAFAVVWAVFRQLPFAWIGQDILGIALIVTVIQIVRVPNLKVGSVLLGCAFLYDIFWVFISKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVAFSLRYDFSAKKGLRSGYFLWAMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGTLIALGWKRGELQNLWARGEPERVCTHMHMPLLPTTPN
Comments
AF1-Unsure
Categories voted by users:
Information
Protein name
Signal peptide peptidase-like 2B
Main knot
51 (73%)
Knot fingerprint
K 51 31 51
Global pLDDT
83.73
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v1:  B4FWD2
PDB structures
-
Model length
536
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.5 13-490 478 1-12, 491-536 12 46 Knot
84.6 11-362 352 1-10, 363-536 10 174 Slipknot
Model Sequence
MAAAAVLVVLTVSALAGAAAGGDIVHHDDEAPKIPGCSNDFILVKVQSWVNGKEGGEFVGVGARFGPKIVSKEKHANRTKLTLADPMDCCSPPKHKVPGDVLLVQRGKCKFTKKAKFAEAAGASAIVIINHVHELYKMVCEKNETDLDINIPAVLLPKDAGSALHTLLTNGNTVSVQLYSPDRPVVDTAEVFLWLMAVGTVLGASYWSAWSAREAVIEQEKLLKDGHEDLLNVEARGSSGMVDINVASAIMFVVVASCFLIMLYKLMSYWFVELLVVIFCIGGVEGLQTCLVALLSRWFKPAAESFVKVPFLGAVSHLTLAVCPFCVAFAVVWAVFRQLPFAWIGQDILGIALIVTVIQIVRVPNLKVGSVLLGCAFLYDIFWVFISKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVAFSLRYDFSAKKGLRSGYFLWAMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGTLIALGWKRGELQNLWARGEPERVCTHMHMPLLPTTPN
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Zea mays
PFAM codes  PF02225,  PF04258
InterPro codes  IPR003137,  IPR006639,  IPR007369,  IPR046450
PDB structures (whole Protein) -
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