B5VFU8 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	YDR046Cp-like protein
Main knot	4₁ (57%)
Global pLDDT	73.3
Species	strain AWRI1631
UniProt	B5VFU8
Structure Prediction Model	AlphaFold v4: B5VFU8
PDB structures	-
Model length	365
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.4	103-340	238	1-102, 341-365	102	25

Model Sequence

MPDPIVTSSKMEKSAEFEVTDSALYNNFNTSTTASLTPEIKEHSEESRNGLVHRFVDSFRRAESQRLEEDNDLEDGTKSMKSNNHLKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPTLPGNFNAYNSIFISKSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFIILSVVINCGGAGVDGYIGGKYWRDPGSFAEGSGATRFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTPVAAKRSVYRILIIYLLTMILIGFNVPHNNDQLMGSGGSATHASPYVLA

Comments

ESM1

Categories voted by users:

Information

Protein name	YDR046Cp-like protein
Main knot	4₁ (56%)
Global pLDDT	83.85
Species	strain AWRI1631
UniProt	B5VFU8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	365
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					61.3	104-340	237	1-103, 341-365	103	25

Model Sequence

Comments

Domain	Eukaryota
Family	Saccharomycetaceae
Species (Full Name)	Saccharomyces cerevisiae (strain AWRI1631) (Baker's yeast)
Gene	AWRI1631_42680
PFAM codes	PF00324
InterPro codes	IPR004840, IPR004841
PDB structures (whole Protein)	-

B5VFU8F1

AF4

Model Sequence

ESM1

Model Sequence