B8NB29 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (66%)
Global pLDDT	84.24
Species	Aspergillus flavus
UniProt	B8NB29
Structure Prediction Model	AlphaFold v4: B8NB29
PDB structures	-
Model length	345
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.2	69-320	252	1-68, 321-345	68	25

Model Sequence

MSSVSKSTPLDKTTSKGSVYADVDHDPVTTVLPNGDVPYTDHAMDADERVIVALGYKQEFKREFSLWTTFCVSFAVLGLLPSFASTIYYGMGYAGTAGMVWGWIIAMVFIQCVAMSMAELCSAMPTSGGLYYAAAVLAPPGYGPFAAWITGWSNWIGQITAAPSVDFSLAAMILAAASIQNPDYVPTSWQTFLLTTLIMILHAAISSMPTKWVAQFNSWGSTFNMFALIAVIIAIPAGTKNEPKFTPSKEVWGTITNLTDFPDGVAVLMTFVGVIWTMSGYDSPFHLSEECSNANIASPRAIVMTSGVGGLMGWFLQLVVAYTVLDIEAIIDSDLGQPWASYLLQ

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (65%)
Global pLDDT	88.32
Species	Aspergillus flavus
UniProt	B8NB29
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	345
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					61.5	71-320	250	1-70, 321-345	70	25

Model Sequence

Comments

Domain	Eukaryota
Family	Aspergillaceae
Species (Full Name)	Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167)
Gene	AFLA_044040
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

B8NB29F1

AF4

Model Sequence

ESM1

Model Sequence