B8P7S9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (64%)
Global pLDDT	82.52
Species	Brown rot fungus
UniProt	B8P7S9
Structure Prediction Model	AlphaFold v4: B8P7S9
PDB structures	-
Model length	341
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.2	12-241	230	1-11, 242-341	11	100

Model Sequence

MSAEEDQGGWQLTESDPGVFTYVHRKISNFYSLMLAGCHSELLKSLGVPLVVDDLYSLDSVSLSEFQPLHAFVFLFKWVGSSAEPTAGQYEPDFPGFFAHQVVNNACATLAVINAIGNIPGLPMSSQLSDLMSFTNGMDPQTRGMAITSSDWLREAHNTLSPPSTISLDGLGLPKTTEEAYHFIVYMPNMGCVYEFDGLKQYPINHGPYQESGEGWVAKAREVIEARIGTYPAGALEFSLLALHDDPVPSLQAHLVELQAAGRQSEAADLVVRLSTENSKRERWAFENSLRRHNYVGLIHALLLAMAKSGKLEAAKEGAKKTMHDRIQKRKEKGESAMDED

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (77%)
Global pLDDT	83.74
Species	Brown rot fungus
UniProt	B8P7S9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	341
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					53.0	12-241	230	1-11, 242-341	11	100

Model Sequence

Comments

Domain	Eukaryota
Family	Dacryobolaceae
Species (Full Name)	Postia placenta (strain ATCC 44394 / Madison 698-R) (Brown rot fungus) (Poria monticola)
Gene	POSPLDRAFT_102659
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

B8P7S9F1

AF4

Model Sequence

ESM1

Model Sequence