B9F1F4F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (55%)
Global pLDDT
84.38
Species
Orysj
UniProt
Structure Prediction Model
AlphaFold v4:  B9F1F4
PDB structures
-
Model length
273
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
83.8 9-268 260 1-8, 269-273 8 5
Model Sequence
MGKRWIPLEANPDVMNQFMWGLGVAEGEAQFCDVYGLDDELLAMVPQPVLAVLFLYPLTSLDDDEEESGAAATSTAGDKDCTITVLEILLVESTIVEFAELDVLVLRLHQCAFSLLLTIQNTWDLSKRVYFTKQTVGNACGTVGVIHAIGNAASKLKLVEGSYFDRFYKQTVDMDPVQRAAFLEEDDEMEDAHSVAASAGDTDANVEVNEHFVCFSCVDGELYELDGRKSQPICHGPSSPDTLLQDAAKVIKARIASNPDSMNFNVMALSKVV
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (60%)
Global pLDDT
84.82
Species
Orysj
UniProt
Structure Prediction Model
PDB structures
-
Model length
273
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
93.3 8-267 260 1-7, 268-273 7 6
Model Sequence
MGKRWIPLEANPDVMNQFMWGLGVAEGEAQFCDVYGLDDELLAMVPQPVLAVLFLYPLTSLDDDEEESGAAATSTAGDKDCTITVLEILLVESTIVEFAELDVLVLRLHQCAFSLLLTIQNTWDLSKRVYFTKQTVGNACGTVGVIHAIGNAASKLKLVEGSYFDRFYKQTVDMDPVQRAAFLEEDDEMEDAHSVAASAGDTDANVEVNEHFVCFSCVDGELYELDGRKSQPICHGPSSPDTLLQDAAKVIKARIASNPDSMNFNVMALSKVV
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Oryza sativa
Gene OsJ_07774
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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