| Protein name |
Integrase catalytic domain-containing protein
|
| Main knot |
31 (51%)
|
| Global pLDDT |
85.19
|
| Species |
[Clostridium] asparagiforme
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 C0CWP0
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 C0CWP0: L0
|
| Model length |
221
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
95.7 | 3-103 | 101 | 1-2, 104-221 | 2 | 118 |
|
Model Sequence |
MQLGITIPLQKFLKWKSPVYGEPENLFFCWDLHVIRFHGENTLMAVNASNAFTVILWKMEWADWENLGQRTLEAIRMGLLNAGYGEETVEAYFRAAGSASFTKTHGRRPVAALNRMTDFLRQAPMKLEVDRQFQSAHSRFVNGNLLKTAGFDLPGRPEGFLNEDMEKNGIKPGRCAHEPSPGAEKCPCRRKCPRRGNCEECLAFHRDQKPGIPAACRKKKR
|
| Protein name |
Integrase catalytic domain-containing protein
|
| Main knot |
31 (51%)
|
| Global pLDDT |
78.66
|
| Species |
[Clostridium] asparagiforme
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
C0CWP0: L0
|
| Model length |
221
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
94.7 | 3-103 | 101 | 1-2, 104-221 | 2 | 118 |
|
Model Sequence |
MQLGITIPLQKFLKWKSPVYGEPENLFFCWDLHVIRFHGENTLMAVNASNAFTVILWKMEWADWENLGQRTLEAIRMGLLNAGYGEETVEAYFRAAGSASFTKTHGRRPVAALNRMTDFLRQAPMKLEVDRQFQSAHSRFVNGNLLKTAGFDLPGRPEGFLNEDMEKNGIKPGRCAHEPSPGAEKCPCRRKCPRRGNCEECLAFHRDQKPGIPAACRKKKR
|
| Domain |
Bacteria
|
| Family |
Lachnospiraceae
|
| Species (Full Name) |
[Clostridium] asparagiforme DSM 15981
|
| Gene |
CLOSTASPAR_01411
|
| PDB structures (whole Protein) |
-
|
C0CWP0