C1FEB9F1

Ribosomal RNA small subunit methyltransferase NEP1
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase NEP1
Main knot
31 (81%)
Global pLDDT
90.52
Species
Picoplanktonic green alga
UniProt
Structure Prediction Model
AlphaFold v4:  C1FEB9
PDB structures
-
Model length
223
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.3 151-196 46 1-150, 197-223 150 27
Model Sequence
METPKLDEDSAAVPGEGYIFVLEKATLEAAKIGKAYQILNCDDHANFLRRHGKDPANFRPDIVHQELLAILDSPLNKAGRVNAVYVHTQKNVLIKISSQTRIPRTFKRFCGLMVQLLQKLSIRAANGPEKLFKVVKGPVTKYFPAGARRVGFSFSAADVKDFKSYINELPSDACVIFTLGAMSHGMIDSTYTDDLISVSHYPLSGACCIARITNCLENKFGIL
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase NEP1
Main knot
31 (76%)
Global pLDDT
90.79
Species
Picoplanktonic green alga
UniProt
Structure Prediction Model
PDB structures
-
Model length
223
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.9 151-196 46 1-150, 197-223 150 27
Model Sequence
METPKLDEDSAAVPGEGYIFVLEKATLEAAKIGKAYQILNCDDHANFLRRHGKDPANFRPDIVHQELLAILDSPLNKAGRVNAVYVHTQKNVLIKISSQTRIPRTFKRFCGLMVQLLQKLSIRAANGPEKLFKVVKGPVTKYFPAGARRVGFSFSAADVKDFKSYINELPSDACVIFTLGAMSHGMIDSTYTDDLISVSHYPLSGACCIARITNCLENKFGIL
Comments
Domain Eukaryota
Family Mamiellaceae
Species (Full Name) Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) (Picoplanktonic green alga)
Gene MICPUN_77569
PFAM codes  PF03587
InterPro codes  IPR005304,  IPR029026,  IPR029028
PDB structures (whole Protein) -
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