C1MLY4 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Predicted protein
Main knot	5₂ (56%)
Global pLDDT	88.82
Species	strain CCMP1545
UniProt	C1MLY4
Structure Prediction Model	AlphaFold v4: C1MLY4
PDB structures	-
Model length	336
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.0	6-303	298	1-5, 304-336	5	33

Model Sequence

MSVHLHFEPAHALIGGAILGVATVGKLLLTGRVLGISGSFKGLVTIGDTSRWRFAFLAGLVGSGLADAYMNPDQVAEPSAGLTRTVVAGLLVGAGSGLGNGCTSGHGICGNSRFAPRSMAYTVLFMATGFAAATLFDTNAALGVNPASALDRMKLPSAEEMIGYGNIIAAAAASFLGLGQLARAHAKKNDGEHTDFHDTLGLVAEVISGFVFGLGLSISGMRRAAKVSGFLSATASSWDPSLMLVMGGAMGLAIPAFARSESETKPHCAREFSVPPKNRGIDKNLLLGGVMFGAGWGLAGMCPGPAIVSFAANPTGTVGAWLLAVVVGMYAQHRVF

Comments

ESM1

Categories voted by users:

Information

Protein name	Predicted protein
Main knot	5₂ (51%)
Global pLDDT	89.49
Species	strain CCMP1545
UniProt	C1MLY4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	336
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.4	11-303	293	1-10, 304-336	10	33

Model Sequence

Comments

Domain	Eukaryota
Family	Mamiellaceae
Species (Full Name)	Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga)
Gene	MICPUCDRAFT_56310
InterPro codes	IPR046513
PDB structures (whole Protein)	-

C1MLY4F1

AF4

Model Sequence

ESM1

Model Sequence