C3ASS9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Spore germination protein
Main knot	3₁ (44%)
Global pLDDT	90.91
Species	Bacillus pseudomycoides
UniProt	C3ASS9
Structure Prediction Model	AlphaFold v4: C3ASS9
PDB structures	-
Model length	339
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.5	14-257	244	1-13, 258-339	13	82

Model Sequence

MPRTAAEKVNTPDVWITVILGGLIAMVAGIIMVKLSQQFPGKTFYQYNQEIVGKWVGAILSLFIVGYFFMLSSFEVKTLEGITSFFLLEGTPGWAIIMPFMWVSLYLNLGGINSIARLFEIIFPITVFIFLFTSFMSIGIFEIDNLRPVLGLGIIPVLKGLKTTTLAYSGAEIMLLLLAFMKQPRQAVKVVLIGTAIPLIFYVTTVVMVIGTFSVDGVLMRTWPTIDLMRSFELPGLIFERFESLLLVIWIMQIFATYTICYYAAALGLAQLFNKNIHSFLYGLLPVIYIVSQIPKNINDLFKLGDVIGNAAMILFGILPLLLLVISRWRKRKNEPKCE

Comments

ESM1

Categories voted by users:

Information

Protein name	Spore germination protein
Main knot	3₁ (43%)
Global pLDDT	94.62
Species	Bacillus pseudomycoides
UniProt	C3ASS9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	339
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.7	2-257	256	1-1, 258-339	1	82

Model Sequence

Comments

Domain	Bacteria
Family	Bacillaceae
Species (Full Name)	Bacillus pseudomycoides
Gene	bmyco0002_42760
PFAM codes	PF03845
InterPro codes	IPR004761
PDB structures (whole Protein)	-

C3ASS9F1

AF4

Model Sequence

ESM1

Model Sequence