| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
86.44 | 7-329 | 323 | 1-6, 330-345 | 6 | 16 |
|
Knot | ||||
|
|
86.45 | 22-214 | 193 | 1-21, 215-345 | 21 | 131 | Knot |
Model Sequence |
MNSKHLKLLITLIALLVLANIGIQFWQPHPATAPQTAKKSRAQTTLPAPKQYAQTPFDWHSVKLESNLWKISKAGQPDSYLLGTIHIGKTDARISPALAQLITQNQKIITEVADGIPESTRQSLVQAMLSDTPLSQKMGSRAFNALKQHIRSYPNAEPLLQSLDQLHPWAVLLNTLSLRETDESNETGADKLITAQATQQHKPLGSLESHIEALAYFHILPEELIIAGLNDWAQRPKKDNDKIIFEAYAHGDFARIPALLQKDTEFNPESSLSPAQQQQFADWFVQQMIVARNRNWLPKIQAEAAKQPTLFAVGTAHLVGNQGLIMLLRHNGYQVEPMPKLAVWQ
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
87.0 | 15-314 | 300 | 1-14, 315-345 | 14 | 31 |
|
Model Sequence |
MNSKHLKLLITLIALLVLANIGIQFWQPHPATAPQTAKKSRAQTTLPAPKQYAQTPFDWHSVKLESNLWKISKAGQPDSYLLGTIHIGKTDARISPALAQLITQNQKIITEVADGIPESTRQSLVQAMLSDTPLSQKMGSRAFNALKQHIRSYPNAEPLLQSLDQLHPWAVLLNTLSLRETDESNETGADKLITAQATQQHKPLGSLESHIEALAYFHILPEELIIAGLNDWAQRPKKDNDKIIFEAYAHGDFARIPALLQKDTEFNPESSLSPAQQQQFADWFVQQMIVARNRNWLPKIQAEAAKQPTLFAVGTAHLVGNQGLIMLLRHNGYQVEPMPKLAVWQ
|
| Protein name |
GumN protein
|
| Main knot |
62 (52%)
|
| Global pLDDT |
86.53
|
| Species |
Kingella oralis
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
345
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
57.7 | 14-288 | 275 | 1-13, 289-345 | 13 | 57 |
|
Model Sequence |
MNSKHLKLLITLIALLVLANIGIQFWQPHPATAPQTAKKSRAQTTLPAPKQYAQTPFDWHSVKLESNLWKISKAGQPDSYLLGTIHIGKTDARISPALAQLITQNQKIITEVADGIPESTRQSLVQAMLSDTPLSQKMGSRAFNALKQHIRSYPNAEPLLQSLDQLHPWAVLLNTLSLRETDESNETGADKLITAQATQQHKPLGSLESHIEALAYFHILPEELIIAGLNDWAQRPKKDNDKIIFEAYAHGDFARIPALLQKDTEFNPESSLSPAQQQQFADWFVQQMIVARNRNWLPKIQAEAAKQPTLFAVGTAHLVGNQGLIMLLRHNGYQVEPMPKLAVWQ
|