C4GN30 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	GumN protein
Main knot	6₂ (54%)
Global pLDDT	86.16
Species	Kingella oralis
UniProt	C4GN30
Structure Prediction Model	AlphaFold v4: C4GN30
PDB structures	-
Model length	345
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.0	15-314	300	1-14, 315-345	14	31

Model Sequence

MNSKHLKLLITLIALLVLANIGIQFWQPHPATAPQTAKKSRAQTTLPAPKQYAQTPFDWHSVKLESNLWKISKAGQPDSYLLGTIHIGKTDARISPALAQLITQNQKIITEVADGIPESTRQSLVQAMLSDTPLSQKMGSRAFNALKQHIRSYPNAEPLLQSLDQLHPWAVLLNTLSLRETDESNETGADKLITAQATQQHKPLGSLESHIEALAYFHILPEELIIAGLNDWAQRPKKDNDKIIFEAYAHGDFARIPALLQKDTEFNPESSLSPAQQQQFADWFVQQMIVARNRNWLPKIQAEAAKQPTLFAVGTAHLVGNQGLIMLLRHNGYQVEPMPKLAVWQ

Comments

ESM1

Categories voted by users:

Information

Protein name	GumN protein
Main knot	6₂ (52%)
Global pLDDT	86.53
Species	Kingella oralis
UniProt	C4GN30
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	345
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					57.7	14-288	275	1-13, 289-345	13	57

Model Sequence

Comments

Domain	Bacteria
Family	Neisseriaceae
Species (Full Name)	Kingella oralis ATCC 51147
Gene	GCWU000324_03119
PFAM codes	PF01963
InterPro codes	IPR002816
PDB structures (whole Protein)	-

C4GN30F1

AF4

Model Sequence

ESM1

Model Sequence