C5XUJ9F1

L-arabinokinase
AF4
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Information
Protein name
L-arabinokinase
Main knot
31 (81%)
Global pLDDT
78.51
Species
Sorghum
UniProt
Structure Prediction Model
AlphaFold v4:  C5XUJ9
PDB structures
-
Model length
1003
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
78.7 501-712 212 1-500, 713-1003 500 291
Model Sequence
MRVRDGDGGGEVTAPPQHLVFAYYITGHGFGHATRALEVVRHLVAAGHDVHVVTAAPEFVFTTEITSPSLHIRKVLLDCGAVQADALTVDRLASLEKYHQTAVVPRESILRTEAEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVVAAGHHHRSIVWQIAEDYSHCEFLLRLPGYCPMPAFRDVIDVPLVVRRLHRSRSEVRKELGIADDVKLVIFNFGGQPAGWELKKEWLPDGWLCLVCGASDTQKLPPNFIKLAKDAYTPDLMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEHYQCGIEMIRRDLLTGHWKPYLQRAITLQPCYDGPINGGEVAAHILQDTAVGKKYISGKLSGARRLRDAIVLGYQLQRAPGRDVGIPDWYSLSEKEISVRPTPTSHDMNGSAESSFEDFEILHGDMQGLTDTMSFLKSLSGLVGNDLRSPEKQTRERAAASVLFDWEEEIYVARAPGRLDVMGGIADYSGSLVLQGPFCNFSLHKMPIREACHVAVQRSDPTKQKQWKHTQARQLANGGAVPVLQIVSFGSELSNRAPTFDMDLSDFMDGDKPISYDKAKEYFSRDPSQKWAAYVAGTIFVLMSELGVRFTDSMSILVSSSVPEGKGVSSSASVEVASMSAIAAAYGLNIAPRDLALLCQKVENRVVGAPCGVMDQMTSACGEANKLLAMVCQPAEVKELVSIPTHIRFWGLDSGIRHSVGGTDYGSVRVGTYMGRKMIKCAASDLLSELLPSCTSMQSGDSNPDEYEEHGVDLLKSEASMEYLCNLPPHRYEAVYAKDIPETITGDVFLEKYGDHNDAVTEVDRKRSYCVRAPTRHPIYENSRVEAFKALLTASKTDEQLSALGELMFQCHYSYNACGLGSDGTDRLVNLVQEIRHRKTLRTGGPSLFGAKITGGGSGGSVCVIGKNCLKSSEEILEIQKRYKAATGYLPIVFEGSSPGACKFGYLKIRRRSTSPSN
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Sorghum bicolor (Sorghum) (Sorghum vulgare)
Gene SORBI_3004G037900
PFAM codes  PF00288,  PF08544
InterPro codes  IPR006204,  IPR012369,  IPR013750,  IPR014721,  IPR020568,  IPR036554
PDB structures (whole Protein) -