C6X216 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Putative rRNA methylase
Main knot	3₁ (75%)
Global pLDDT	93.1
Species	strain 3519-10
UniProt	C6X216
Structure Prediction Model	AlphaFold v4: C6X216
PDB structures	-
Model length	257
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.4	183-225	43	1-182, 226-257	182	32

Model Sequence

MIESLQNEKIKHLTRLLTDNRFRKKSGTFAVEGKQENERARKFGYEPVEYFLCESIFDEDFPAGKISLVSEKVYEKVAYRGSSEGIIGIYNTKSFNLNAFAIKEDSSVIIIESVEKPGNLGAVLRSCEAFGIDALIITDPKVDFYNPNVIRSSVGCLFGMDIFQSENNALLDFLESNHFKIFTTRMSDDATDIFNQDFGGRSALVFGTEHSGLSDFWIGKGTNTLVPMTGSIDSLNLSNAVAVSGYEILRQKLQKST

Comments

ESM1

Categories voted by users:

Information

Protein name	Putative rRNA methylase
Main knot	3₁ (84%)
Global pLDDT	94.91
Species	strain 3519-10
UniProt	C6X216
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	257
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.4	32-107	76	1-31, 108-257	31	150

Model Sequence

Comments

Domain	Bacteria
Family	Flavobacteriaceae
Species (Full Name)	Flavobacteriaceae bacterium (strain 3519-10)
Gene	FIC_02037
PFAM codes	PF00588
InterPro codes	IPR001537, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

C6X216F1

AF4

Model Sequence

ESM1

Model Sequence