C9STP1F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (51%)
Global pLDDT
92.17
Species
Verticillium wilt of alfalfa
UniProt
Structure Prediction Model
AlphaFold v4:  C9STP1
PDB structures
-
Model length
247
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
93.1 18-241 224 1-17, 242-247 17 6
Model Sequence
MATPNPDPPSTAPAFIPLEANPQLMTTLLHKLGLSSALQIHDVYSLTDPDLLAFIPRPALALLLVFPVSATYESHRLAEDALLDDYKGHGDGAPVVWFRQTIRNACGLMGLLHAVANGPARDYIEASSDLDTLLQQALPLHPAERAALLEKSTALANAHRSAASQGDTSAPEATDDVDLHYVCFVKTTDGAFWELDGRRKGPLQRGQLEESEDVLSTKALTLGPLKFLEREGADLRFSAVALAGATD
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (61%)
Global pLDDT
90.77
Species
Verticillium wilt of alfalfa
UniProt
Structure Prediction Model
PDB structures
-
Model length
247
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
85.4 18-241 224 1-17, 242-247 17 6
Model Sequence
MATPNPDPPSTAPAFIPLEANPQLMTTLLHKLGLSSALQIHDVYSLTDPDLLAFIPRPALALLLVFPVSATYESHRLAEDALLDDYKGHGDGAPVVWFRQTIRNACGLMGLLHAVANGPARDYIEASSDLDTLLQQALPLHPAERAALLEKSTALANAHRSAASQGDTSAPEATDDVDLHYVCFVKTTDGAFWELDGRRKGPLQRGQLEESEDVLSTKALTLGPLKFLEREGADLRFSAVALAGATD
Comments
Domain Eukaryota
Family Plectosphaerellaceae
Species (Full Name) Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt of alfalfa) (Verticillium albo-atrum)
Gene VDBG_08312
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
How to cite