D0NWA7 | AlphaKnot 2.0

AF4

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Information

Protein name	Amino Acid/Auxin Permease (AAAP) Family
Main knot	4₁ (78%)
Global pLDDT	77.07
Species	strain T30-4
UniProt	D0NWA7
Structure Prediction Model	AlphaFold v4: D0NWA7
PDB structures	-
Model length	273
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					80.7	29-253	225	1-28, 254-273	28	20

Model Sequence

MATSNGKTAFFTMEDAKASFNLFCCVCGIGSLAMPSNYARAGPFYASIALAFMIFANTYATLKLSKVMLVAPSSVRTYGDLGEWALGKWGRFFTVVSQMGVCLLVPCAFLVLGSTLLEVLFPDCFSQTVWIIFMALMVIPVCLIPTLKESAGMAFAGCMGTIVADIIAVVVLQYNMRGHGSIPSPDITAHQVLTCFGNLALAYGAAIVVPDLQREHSQPQRMPRVVVITILFISGFFVAIALAGYTAGGCQLSGNILYSIVSTCTFPSLSRRS

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino Acid/Auxin Permease (AAAP) Family
Main knot	4₁ (74%)
Global pLDDT	90.62
Species	strain T30-4
UniProt	D0NWA7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	273
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.7	27-248	222	1-26, 249-273	26	25

Model Sequence

Comments

Domain	Eukaryota
Family	Peronosporaceae
Species (Full Name)	Phytophthora infestans (strain T30-4) (Potato late blight agent)
Gene	PITG_17800
PFAM codes	PF01490
InterPro codes	IPR013057
PDB structures (whole Protein)	-

D0NWA7F1

AF4

Model Sequence

ESM1

Model Sequence