D1AG90 | AlphaKnot 2.0

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Information

Protein name	DUF4377 domain-containing protein
Main knot	5₁ (90%)
Global pLDDT	89.23
Species	Sebaldella termitidis
UniProt	D1AG90
Structure Prediction Model	AlphaFold v4: D1AG90
PDB structures	-
Structure in AlphaLasso	D1AG90: LS_2++C
Model length	101
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.9	34-91	58	1-33, 92-101	33	10

MKRVFIFLLFGAVIFSGNIGSDCTLNGKRLYGKVRVVSSMADFKVEVVSSGADLKVEQVKMFSDSCGKWEFVDMLSDFTVEFVNVNSDFKIEFVNMFPGVQ

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Categories voted by users:

Information

Protein name	DUF4377 domain-containing protein
Main knot	7₂ (88%)
Global pLDDT	52.56
Species	Sebaldella termitidis
UniProt	D1AG90
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	D1AG90: LS_2++C
Model length	101
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					28.4	31-91	61	1-30, 92-101	30	10

MKRVFIFLLFGAVIFSGNIGSDCTLNGKRLYGKVRVVSSMADFKVEVVSSGADLKVEQVKMFSDSCGKWEFVDMLSDFTVEFVNVNSDFKIEFVNMFPGVQ

Comments

Domain	Bacteria
Family	Leptotrichiaceae
Species (Full Name)	Sebaldella termitidis (strain ATCC 33386 / NCTC 11300)
Gene	Sterm_3882
PDB structures (whole Protein)	-

D1AG90F1