| Protein name |
Stabilin 1
|
| Main knot |
31 (45%)
|
| Global pLDDT |
71.49
|
| Species |
Rat
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 D3ZWH1
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 D3ZWH1: LSL2++,-1 LS3+++N LS2++N LS2++C L-1N L-1C L+2C L+1N
|
| Model length |
2574
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
72.5 | 98-1704 | 1607 | 1-97, 1705-2574 | 97 | 870 |
|
Model Sequence |
MAEPRILLLLCILVLCLAGSGFIRGQTVRSKRCDIHTKFITHTPCTACAAIRRRLCPSGWSRNFPEKILLDCRYELQLRGSVVSLSGCSQECWKDVVQKACCPGYWGSQCYECPGGPATPCSGHGTCLDGIGGNGTCVCQENFSGSACQDCRDPNRFGPDCQSVCNCVHGVCSRGPQGNGSCQCFAGYTGPHCDQELPVCQSLRCPQNSQCSAEAPACKCLPGYIQQDNACLREPLDPCQPSPCSSLARCSVTPSGQPQCHCPENYHGDGKVCLPQDPCLTNFGGCPSNSTFCLYRAPGKATCMCWPGMTSINNDASEGCHVSCKPHSCDKSATCQVTPDRKTSCVCKSDEVGDGYACYGHLLHEVQRANQIGLVLLRLRVAIAMLEQGCQEILTTSGPFTVLVPSMFSVSAISSSNMNATLAQQLCRQHIIPGEHILENIGPSNTRRWWTLAGQEITVTFKNLRYSYKYEDQPQQFSIQKANYIAANGVFHTVTALRWQLPPPLPGDPKKTVGQILASTEAFTRFETILENCGLPAMLDGPGPFTVFAPSNEAVDSLRDGRLIYLFTAGLSKLQELVRYHIYNHGQLTVEKLISKGRFLTMANQVLTVNISEEGRILLGPEGVPVRRVDVPAANGVIHMLEGILLPPTILPILPKHCDEEQHQTVLGSCVDCQALNTSICPPNSVKMDIFPKECVYTHDPAGLNVLKKGCAEYCNQTITKRGCCKGFFGPDCTQCPGGFSNPCYGKGNCSDGVQGNGACLCFPDYKGIACHICSNPNKHGEQCQEDCGCVHGLCDNRPGSGGVCQQGTCAPGFQGRFCNESMGNCGSLGLAQPCHPDAHCVIQEGVARCVCHDGFEGNGFSCKRSSPCSHPDRGGCSENAECVPGDLGTHQCICHKGWSGDGRICVAIDECGLDTRGGCHADALCSYVGPGQSRCTCKLGFAGDGYECSPIDPCRVGNGGCHGLATCKAVGGGQRVCTCPPHFGGDGFSCYGDIIQELEANAHFSAFSQWFKNSSITLPADGKLTALVPSESAIRRLRPEDQAFWLQPKTLPELVRAHFLQGAFSEEELARLSGQQVATLSATTHWQIHNTSGRVQVQNATVDVPDLLATNGVLHIISQVLLPPRGDMQTGPGLLQQLDSVPAFRLFGEQLKHHKLVAQIEAAKAYTIFVPTNHSLETQGNKSILGIDIVRHHVILGEALSVEVLRKGGHRNSLLGPAHWLVFYNHSGQPEVNHVPLEGPLLEAPGSALFGLSGILAVGSSRCLHSHAEALREKCVNCTRKFRCTQGFQLQDTPRKSCVYRSGLSFSRGCSYTCAKKIQVPDCCPGFFGTLCEPCPGGLGGVCSGHGQCQDRFLGNGECRCQEGFHGTACEMCELGRYGPTCSGVCDCDHGLCQEGLRGNGSCICNVGWQGLRCDQKITDRQCPKKCDPNANCIQDSAGIPVCVCAAGYSGNGSYCSEVDPCTSGHGGCSPYANCTKVAPGQRTCTCLDGYTGDGELCQEINSCLVHNGGCHVNAECIPTGPQQVSCNCREGYSGDGIQSCKLLDPCSQNNGGCSPYAVCKSTGDGQRTCSCDSTHTVGDGITCHGRVGLELLRNKYASFFSLHLLEYKELKGDGPFTIFVPHSDLISNMSQGELARMRAHRQLVFRYHVLGCRKLGSQELLDQGYVTALSGHTLRISEREGSIYLNDFARVVSSDHEAVNGVLHFIDRVLLPPDVLHWEADTIPIPRRNVTAAAESFQYKIFSRLLTVAGLLPMLQDASHRPFTMLWPTDSALEALSPDRKNWLYHEDHRDKLAAILRGHVIRNIEASASDLPNLGQLRTMHGNTISFSCGLARPGELMVGENEARIVQRYLLFEGGLAYGIDQLLEPPDLGARCDRFEPQPLQTKTCSICGLEPPCPRGSREQGSPEACWRHYSKFWATPLHSITMRGGSWITPSFWNRNHMGRGCHRKCVTTVWKPSCCPGHYGADCHACPGGPRSPCSGHGVCLDGISGSGQCNCHPGFAGTACELCAPGAFGPQCQACRCAPHGRCDEGLGGSGSCFCDEGWTGPRCDVQLELQPVCTPPCAPQAVCRVGNSCECSLGYEGDGRVCTVADLCQKGHGGCSKHANCSQVGTVVTCTCLPAYEGDGWSCRARNPCLDGHRGGCSEHADCFNTGPNTRRCECHTGYVGDGLQCLEELEPPVDRCLAESSPCHTDALCTDLHFQEKQAGVFHIQATSGPYGLTFSEAKEACEDQGADLASLPQLSAAQQV
|
| Protein name |
Stabilin 1
|
| Main knot |
31 (55%)
|
| Knot fingerprint |
K 31 814(x13) 52(x2)
|
| Global pLDDT |
71.49
|
| Species |
Rat
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v1:
D3ZWH1
|
| PDB structures |
-
|
| Structure in AlphaLasso |
D3ZWH1: LSL2++,-1 LS3+++N LS2++N LS2++C L-1N L-1C L+2C L+1N
|
| Model length |
2252
|
| AlphaFold deposition date |
2021-07-01
|
| AlphaKnot deposition date |
2021-12-18
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
72.0 | 99-1583 | 1485 | 1-98, 1584-2252 | 98 | 669 |
|
Knot | ||||
 |
72.5 | 139-1291 | 1153 | 1-138, 1292-2252 | 138 | 961 | Slipknot | |||||
 |
72.5 | 84-1726 | 1643 | 1-83, 1727-2252 | 83 | 526 | Slipknot |
Model Sequence |
MAEPRILLLLCILVLCLAGSGFIRGQTVRSKRCDIHTKFITHTPCTACAAIRRRLCPSGWSRNFPEKILLDCRYELQLRGSVVSLSGCSQECWKDVVQKACCPGYWGSQCYECPGGPATPCSGHGTCLDGIGGNGTCVCQENFSGSACQDCRDPNRFGPDCQSVCNCVHGVCSRGPQGNGSCQCFAGYTGPHCDQELPVCQSLRCPQNSQCSAEAPACKCLPGYIQQDNACLREPLDPCQPSPCSSLARCSVTPSGQPQCHCPENYHGDGKVCLPQDPCLTNFGGCPSNSTFCLYRAPGKATCMCWPGMTSINNDASEGCHVSCKPHSCDKSATCQVTPDRKTSCVCKSDEVGDGYACYGHLLHEVQRANQIGLVLLRLRVAIAMLEQGCQEILTTSGPFTVLVPSMFSVSAISSSNMNATLAQQLCRQHIIPGEHILENIGPSNTRRWWTLAGQEITVTFKNLRYSYKYEDQPQQFSIQKANYIAANGVFHTVTALRWQLPPPLPGDPKKTVGQILASTEAFTRFETILENCGLPAMLDGPGPFTVFAPSNEAVDSLRDGRLIYLFTAGLSKLQELVRYHIYNHGQLTVEKLISKGRFLTMANQVLTVNISEEGRILLGPEGVPVRRVDVPAANGVIHMLEGILLPPTILPILPKHCDEEQHQTVLGSCVDCQALNTSICPPNSVKMDIFPKECVYTHDPAGLNVLKKGCAEYCNQTITKRGCCKGFFGPDCTQCPGGFSNPCYGKGNCSDGVQGNGACLCFPDYKGIACHICSNPNKHGEQCQEDCGCVHGLCDNRPGSGGVCQQGTCAPGFQGRFCNESMGNCGSLGLAQPCHPDAHCVIQEGVARCVCHDGFEGNGFSCKRSSPCSHPDRGGCSENAECVPGDLGTHQCICHKGWSGDGRICVAIDECGLDTRGGCHADALCSYVGPGQSRCTCKLGFAGDGYECSPIDPCRVGNGGCHGLATCKAVGGGQRVCTCPPHFGGDGFSCYGDIIQELEANAHFSAFSQWFKNSSITLPADGKLTALVPSESAIRRLRPEDQAFWLQPKTLPELVRAHFLQGAFSEEELARLSGQQVATLSATTHWQIHNTSGRVQVQNATVDVPDLLATNGVLHIISQVLLPPRGDMQTGPGLLQQLDSVPAFRLFGEQLKHHKLVAQIEAAKAYTIFVPTNHSLETQGNKSILGIDIVRHHVILGEALSVEVLRKGGHRNSLLGPAHWLVFYNHSGQPEVNHVPLEGPLLEAPGSALFGLSGILAVGSSRCLHSHAEALREKCVNCTRKFRCTQGFQLQDTPRKSCVYRSGLSFSRGCSYTCAKKIQVPDCCPGFFGTLCEPCPGGLGGVCSGHGQCQDRFLGNGECRCQEGFHGTACEMCELGRYGPTCSGVCDCDHGLCQEGLRGNGSCICNVGWQGLRCDQKITDRQCPKKCDPNANCIQDSAGIPVCVCAAGYSGNGSYCSEVDPCTSGHGGCSPYANCTKVAPGQRTCTCLDGYTGDGELCQEINSCLVHNGGCHVNAECIPTGPQQVSCNCREGYSGDGIQSCKLLDPCSQNNGGCSPYAVCKSTGDGQRTCSCDSTHTVGDGITCHGRVGLELLRNKYASFFSLHLLEYKELKGDGPFTIFVPHSDLISNMSQGELARMRAHRQLVFRYHVLGCRKLGSQELLDQGYVTALSGHTLRISEREGSIYLNDFARVVSSDHEAVNGVLHFIDRVLLPPDVLHWEADTIPIPRRNVTAAAESFQYKIFSRLLTVAGLLPMLQDASHRPFTMLWPTDSALEALSPDRKNWLYHEDHRDKLAAILRGHVIRNIEASASDLPNLGQLRTMHGNTISFSCGLARPGELMVGENEARIVQRYLLFEGGLAYGIDQLLEPPDLGARCDRFEPQPLQTKTCSICGLEPPCPRGSREQGSPEACWRHYSKFWATPLHSITMRGGSWITPSFWNRNHMGRGCHRKCVTTVWKPSCCPGHYGADCHACPGGPRSPCSGHGVCLDGISGSGQCNCHPGFAGTACELCAPGAFGPQCQACRCAPHGRCDEGLGGSGSCFCDEGWTGPRCDVQLELQPVCTPPCAPQAVCRVGNSCECSLGYEGDGRVCTVADLCQKGHGGCSKHANCSQVGTVVTCTCLPAYEGDGWSCRARNPCLDGHRGGCSEHADCFNTGPNTRRCECHTGYVGDGLQCLEELEPPVDRCLAESSPCHTDALCTDLHFQEKQAGVFHIQATSGPYGLTFSEAKEACEDQGADLASLPQLSAAQQV
|
D3ZWH1
IPR000538