D4A5I4F1

Neuron navigator 1
AF6
Categories voted by users:
Information
Protein name
Neuron navigator 1
Main knot
945 (27%)
Global pLDDT
49.08
Species
Rat
UniProt
Structure Prediction Model
AlphaFold v6:  D4A5I4
PDB structures
-
Model length
2149
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
Model Sequence
MNGMANVNSASRPHYASSIPVPRASSQTRIHTPGASPQLRPRQQADLALSPQRGVSPRRGKAAVSSRNSSPKAYRGRGTPRGAGPARELAGSVESLPGSPWNSPRVTPKTGSRRTGETQSTQKKKTQEGIPVRQTRGRSPPQTSCHGETQIPGPPEGRLPSGCRGKDQRNINYKAPRCLEPEEGEASGTSSPVLSPVQSARPSATPGVISFSSAHQQSQPITATVAPFQYRLQTDQEPGPVPQESRVLDGYTSPPIRTEDSFSCVDARIVHALLTGRMLGSSVKSVQPEVELSGGSGSGGDEGADEPRGASRKAAAADGRGMLPKRAKAAGSSGSMAKASAAELKVFKSGSVDSRVPGGLPVSNLRKQKSLTNLSFLTDSEKKLQLYEPEWSDDMAKAPKGLGKLGPKGRETPLMSKTLSKSEHSLFQPKGGPAGGAKTPLAPLAPSLGKPSRIPRGPYAEVKPLSKAPEAAVSDDGKSDDELLSSKAKAQKGSGTVPSAKGQEERAFLKVDPELVVTVLGDLEQLLFSQMLDPESQRKRTVQNVLDLRQNLEETMSSLRGSQVTHSSLEMSCYDSDDANPRSVSSLSNRSSPLSWRYGQSSPRLQAGDAPSVGGSCRSEGPPAWYMHGERAHYSHTMPMRSPSKLSHISRLELVESLDSDEVDLKSGYMSDSDLMGKTMTEDDDITTGWDESSSISSGLSDASDNLSSEEFNASSSLNSLPTTPTASRRSSTIVLRTDSEKRSLAESGLSWFSESEEKTPKKLEYDSGSLKMEPGTSKWRRERPESCDDSSKGGELKKPISLGHPGSLKKGKTPPVAVTSPITHTAQSALKVAGKPEGKATDKGKLAVKNTGLQRSSSDAGRDRLSDAKKPPSGIARPSTSGSFGYKKPPPATGTATVMQTGGSATLSKIQKSSGIPVKPLNGRKTSLDVSNSVEPGFLAPGARSNIQYRSLPRPAKSSSMSVTGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPSKVASGRSTPAPVNQTDREKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPPATKLAELPPTPLRATAKSFVKPPSIANLDKVNSNSLDLPSSSDTHASKVPDLHATSSSTGSPLPSCFTPSPAPILNINSASFSQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSTAPIPTPPTAPSEEETEELPWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQAELPSPPALSMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSLAERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEKVATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEAQAVIQGALNASEATPKELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKKKSWLRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKSSNSSSVGTEVTETPAHSAPHTRLFQANEEEEPEKKEVSELRSELWEKEMKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQAPGSSALSSPRRSLGLALSHPFSPSLTDTDLSPMDGISTCGPKEEVTLRVVVRMPPQHIIKGDLKQQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSLSHVKRVLDAEPPEMPPCRRGVNNISVALKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSGPSGTGKTYLTNRLAEYLVERSGREVTDGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGIGDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLTFSNNVEPANGFLVRYLRRKLVESDSDVNANKEELLRVLDWVPKLWYHLHTFLEKHSTSDFLIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDTLPWPSAQQDQSKLYHLPPPSVGPHSIASPPEDRTVKDSTPNSLDSDPLMAMLLKLQEAANYIESPDRETILDPNLQATL
Comments
AF1-Artifact
Categories voted by users:
Information
Protein name
Neuron navigator 1
Main knot
Unknown (91%)
Knot fingerprint
K Unknown(x6) 51(x48) 31(x25)
Global pLDDT
46.79
Species
Rat
UniProt
Structure Prediction Model
AlphaFold v1:  D4A5I4
PDB structures
-
Model length
2149
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
37.5 612-1569 958 1-611, 1570-2149 611 580 Knot
39.0 849-1436 588 1-848, 1437-2149 848 713 Slipknot
37.8 737-1468 732 1-736, 1469-2149 736 681 Slipknot
Model Sequence
MNGMANVNSASRPHYASSIPVPRASSQTRIHTPGASPQLRPRQQADLALSPQRGVSPRRGKAAVSSRNSSPKAYRGRGTPRGAGPARELAGSVESLPGSPWNSPRVTPKTGSRRTGETQSTQKKKTQEGIPVRQTRGRSPPQTSCHGETQIPGPPEGRLPSGCRGKDQRNINYKAPRCLEPEEGEASGTSSPVLSPVQSARPSATPGVISFSSAHQQSQPITATVAPFQYRLQTDQEPGPVPQESRVLDGYTSPPIRTEDSFSCVDARIVHALLTGRMLGSSVKSVQPEVELSGGSGSGGDEGADEPRGASRKAAAADGRGMLPKRAKAAGSSGSMAKASAAELKVFKSGSVDSRVPGGLPVSNLRKQKSLTNLSFLTDSEKKLQLYEPEWSDDMAKAPKGLGKLGPKGRETPLMSKTLSKSEHSLFQPKGGPAGGAKTPLAPLAPSLGKPSRIPRGPYAEVKPLSKAPEAAVSDDGKSDDELLSSKAKAQKGSGTVPSAKGQEERAFLKVDPELVVTVLGDLEQLLFSQMLDPESQRKRTVQNVLDLRQNLEETMSSLRGSQVTHSSLEMSCYDSDDANPRSVSSLSNRSSPLSWRYGQSSPRLQAGDAPSVGGSCRSEGPPAWYMHGERAHYSHTMPMRSPSKLSHISRLELVESLDSDEVDLKSGYMSDSDLMGKTMTEDDDITTGWDESSSISSGLSDASDNLSSEEFNASSSLNSLPTTPTASRRSSTIVLRTDSEKRSLAESGLSWFSESEEKTPKKLEYDSGSLKMEPGTSKWRRERPESCDDSSKGGELKKPISLGHPGSLKKGKTPPVAVTSPITHTAQSALKVAGKPEGKATDKGKLAVKNTGLQRSSSDAGRDRLSDAKKPPSGIARPSTSGSFGYKKPPPATGTATVMQTGGSATLSKIQKSSGIPVKPLNGRKTSLDVSNSVEPGFLAPGARSNIQYRSLPRPAKSSSMSVTGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPSKVASGRSTPAPVNQTDREKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPPATKLAELPPTPLRATAKSFVKPPSIANLDKVNSNSLDLPSSSDTHASKVPDLHATSSSTGSPLPSCFTPSPAPILNINSASFSQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSTAPIPTPPTAPSEEETEELPWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQAELPSPPALSMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSLAERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEKVATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEAQAVIQGALNASEATPKELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKKKSWLRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKSSNSSSVGTEVTETPAHSAPHTRLFQANEEEEPEKKEVSELRSELWEKEMKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQAPGSSALSSPRRSLGLALSHPFSPSLTDTDLSPMDGISTCGPKEEVTLRVVVRMPPQHIIKGDLKQQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSLSHVKRVLDAEPPEMPPCRRGVNNISVALKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSGPSGTGKTYLTNRLAEYLVERSGREVTDGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGIGDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLTFSNNVEPANGFLVRYLRRKLVESDSDVNANKEELLRVLDWVPKLWYHLHTFLEKHSTSDFLIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDTLPWPSAQQDQSKLYHLPPPSVGPHSIASPPEDRTVKDSTPNSLDSDPLMAMLLKLQEAANYIESPDRETILDPNLQATL
Comments
Domain Eukaryota
Family Muridae
Species (Full Name) Rattus norvegicus
PDB structures (whole Protein) -
How to cite