D6EY81 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (42%)
Global pLDDT	83.0
Species	Streptomyces lividans
UniProt	D6EY81
Structure Prediction Model	AlphaFold v4: D6EY81
PDB structures	-
Model length	350
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.4	21-261	241	1-20, 262-350	20	89

Model Sequence

MTDTSVRIDGNRLSLPGGATVRFIRTLRLPETGTHPLPPGLGEFPVRRVADYADRVPEAWRARGGVMLPVYLREAMWLSFAGTREPAALQVGVGKVCAVSGRPWSDRLSRDPQNYVVLPRQPWLDGINSGTGTVRQFVAVPLGMGASVEGQVTGEEVWGGVQLQAFTLNDTELARWREEERRRAETARRAARPGGALGAPAPASAPAAPGAAPAYGGAARPRSAPAMGLGVGGSMRQEVYRDRRPPTDWAKRPAGRVFVHLVTPPEWRRITGEAPPPSPVDRAAYTRAGLPWYDYYDQDAHDLAPTEPLRDVQPVGDWIGDDHEPWQPPAPHQVHPLGDAPGKPVQDGDW

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (58%)
Global pLDDT	74.43
Species	Streptomyces lividans
UniProt	D6EY81
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	350
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.1	22-276	255	1-21, 277-350	21	74

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces lividans TK24
Gene	SSPG_06800
PDB structures (whole Protein)	-

D6EY81F1

AF4

Model Sequence

ESM1

Model Sequence