D8LU79F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (80%)
Global pLDDT
88.73
Species
Brown alga
UniProt
Structure Prediction Model
AlphaFold v4:  D8LU79
PDB structures
-
Model length
254
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
93.1 26-244 219 1-25, 245-254 25 10
Model Sequence
MAEAEALSAPSPFKSDKGRKRWFPLESNPDVMNKYIAKMGWPAGAYSFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKHREEEAARVRESTESLNPKLYFMKQTVGNACGTVGLLHCALNASISKGITLDKECFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQEGQSDQIAREEKINTHFVCLTEMDGTLYELDGRKEGPVPHGSTSPATLLQDACAVVKQFMDRDPGELRFTIVALAPTATDDA
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (79%)
Global pLDDT
90.8
Species
Brown alga
UniProt
Structure Prediction Model
PDB structures
-
Model length
254
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
75.8 25-244 220 1-24, 245-254 24 10
Model Sequence
MAEAEALSAPSPFKSDKGRKRWFPLESNPDVMNKYIAKMGWPAGAYSFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKHREEEAARVRESTESLNPKLYFMKQTVGNACGTVGLLHCALNASISKGITLDKECFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQEGQSDQIAREEKINTHFVCLTEMDGTLYELDGRKEGPVPHGSTSPATLLQDACAVVKQFMDRDPGELRFTIVALAPTATDDA
Comments
Domain Eukaryota
Family Ectocarpaceae
Species (Full Name) Ectocarpus siliculosus (Brown alga) (Conferva siliculosa)
Gene Esi_0099_0001
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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