D9VTU6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (43%)
Global pLDDT	79.15
Species	Streptomyces sp
UniProt	D9VTU6
Structure Prediction Model	AlphaFold v4: D9VTU6
PDB structures	-
Model length	369
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.9	70-278	209	1-69, 279-369	69	91

Model Sequence

MVNEEMGAARIEGNTLLLGEAVRIRFIRTLRLPESGTHALPPGLGEFPLRRVEDYPDTVPPEWLAKGGVMLPVYLREAMWLSFGGSHEPAALQVGVGKVCAVSGKRWTGRLERRPQNYLVLPRQPWLDGINSGKGTVRQFVAVPLGLGATVEGQVTGEEVTGGVQLQAFPLGPEALAAWREEERLRNEATAAQNLYGGGGYGAAPAMPPAMPAPPGAAPMAMAAPAPGAAPARPAARRAPAPAMGLGVGGAMRQEVYQDDRKLSAWADRPAARVFVHLVTPPEWRRITGEDAPPSPVDRAAYTRAGLPWYDYYDETGTDLPAAGPLAGVKPVGDWIGDDHTPWTPPAPGQVLPLGNAPRPGKPVQDGDW

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (70%)
Global pLDDT	72.61
Species	Streptomyces sp
UniProt	D9VTU6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	369
ESM generation time	2023-04-21: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.0	26-292	267	1-25, 293-369	25	77

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces sp. C
Gene	SSNG_06235
PDB structures (whole Protein)	-

D9VTU6F1

AF4

Model Sequence

ESM1

Model Sequence