E3DNH6F1

Oligopeptide transporter, OPT family
AF4
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Information
Protein name
Oligopeptide transporter, OPT family
Main knot
52 (59%)
Global pLDDT
87.63
Species
Halanaerobium praevalens
UniProt
Structure Prediction Model
AlphaFold v4:  E3DNH6
PDB structures
-
Model length
645
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.8 101-583 483 1-100, 584-645 100 62
Model Sequence
MSDNNSKRLSRSAYGGVKGEDYVPYVPTTEVVPEATGYSIIMGVLFAVIFAAANTYLGLKVGLTISAGIPGAILATGILKSIFKRDTILEANYVASLAAVGESIAGGIIFVLPAIILIGFNLSITTVAIVTIIGGFMGVYFITPVRKYMIVEEHGNLIYPESMAQAEVLVNSSQGGEGFKSVLKGLVVGLGYKVFSGGLGLWNESASYTITAYQGAVVGMDTLASLMGVGFIVGTQTSILMFGGSVVAWLGLIPLIKFFGSFSGTAIFPSTMLISEMTAPQIWSNYIRYIGAGAVAAGGFFSLAKSLPTIITSFKEAMGGFGKSTESNERINQDAPIIWVLAAAILGFLFIWVIPSLGAGPVGALMAVVFSFFFAVVSARMVGVIGASNNPVSGMTIATLLVIASVYKALGATGTGGMRMALLASGIVCVAVAVAGGVAQSLKATYVIGGTPKKIQHGMFLALAVASLMAGATVLLLDSAYGIGSAEVTAPQSTLMKLIVEGIMIGKLPWTLVIIGVMIAAFCALASLPILPVALGLYLPISLNSAIFFGGIVRNFVDKKFKGKDKAKDAAVERGTLIASGLVAGDALTGIAIGLFAALNIKTDLLASVIPNAAFKNLLSLGLFVLLAIWMYNYSIKIKDSVKND
Comments
Domain Bacteria
Family Halanaerobiaceae
Species (Full Name) Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL)
Gene Hprae_0358
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR004814,  IPR045035
PDB structures (whole Protein) -