E3QM34 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Choline transporter
Main knot	4₁ (80%)
Global pLDDT	77.62
Species	Maize anthracnose fungus
UniProt	E3QM34
Structure Prediction Model	AlphaFold v4: E3QM34
PDB structures	-
Model length	344
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.3	56-299	244	1-55, 300-344	55	45

Model Sequence

MPQNRAAESALAFDDETVVAVHDGVALNAAGHKDQLKRQYGFLGLASLALTVDNAWLGLGSSISVSILNGGPPGIIYGLLVAVFYYTLIGLSLSELASSVPTAGGVYHWATIAGGPRWGRALGFFTGWINFSGWLFALASLIQISSNVAVSMYAVWNWDDYVCQPFHVFIGYLIILWGSAAFVVFANKYTPYTQHAGTLFVMIGGVVTIIVLATMTRQHASNHFVWASFHENNATGWPGVVAFLLGVLNGAFTIGTPDSVTHMAEELPHPKTDLPKAILLQIFLGFIYAFCFAVALSYAITDITALQGGFNSFPLTNIYVQATTSPNGIRNPGLILTVSNPFGG

Comments

ESM1

Categories voted by users:

Information

Protein name	Choline transporter
Main knot	4₁ (50%)
Global pLDDT	83.17
Species	Maize anthracnose fungus
UniProt	E3QM34
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	344
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					62.3	51-296	246	1-50, 297-344	50	48

Model Sequence

Comments

Domain	Eukaryota
Family	Glomerellaceae
Species (Full Name)	Colletotrichum graminicola (strain M1.001 / M2 / FGSC 10212) (Maize anthracnose fungus) (Glomerella graminicola)
Gene	GLRG_07066
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

E3QM34F1

AF4

Model Sequence

ESM1

Model Sequence