E4YTP8F1

Laminin subunit beta-1
AF4
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Information
Protein name
Laminin subunit beta-1
Main knot
Unknown (70%)
Global pLDDT
71.42
Species
Tunicate
UniProt
Structure Prediction Model
AlphaFold v4:  E4YTP8
PDB structures
-
Structure in AlphaLasso
  E4YTP8: LS3---C  LS2--C  L0  L-1N  L+1C
Model length
1258
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
67.8 289-812 524 1-288, 813-1258 288 446
Model Sequence
MKVAKLLLGAGVWAQQNAQDDSQHYSDCSTGHCFPATGDLLIGRESRLSATSTCGLEGEEGFCIVSNTNGQGPCKKCDTRRKWSPSDPTTHNAHNVENIIAFKTEVSYERRWWQSENGKDEVSIQVDFEAEFLFTHLIMTFKTFRPASMSVYRSSDNGESWKPYRHFAEDCASSFPDVEATPNQDTIDQVVCDDSYGKKVPTTNGELVLKVLDPQLTGSMDPYSPEIRDLLQVTNIRVDFHELHTLGDDHMDNSHDATNKYYYAVYNLVLRGSCFCNGHASQCVPKDDEIVNADVYGKCNCQHGTAGLNCEKCADFHHDQPWMPARANQTFECKRCECYGHATECHFDPDVYEATDSTSGGVCEQCKHNTEGRMCERCIEGYYQDPLKNINDPEICVLCDCEPAGVVGACDRATIPGPDGTVAGRCRCKANVMGERCDQCKPGFHSLDPNNPNGCSPCDCDDRGSVMRGGSICDPLNGQCHCKSNVTGGRCDTCAPHTYGLSSGDADGCKKCRCDIGGSLNQNCNTVDGKCICRPNITGQRCNDVKEDHFLPHTFINTVITQFVSISARSSFFELLLANHGSTYGYENIDNYVPARPGTSVFFEVGDLPRSLPYSLHLKISPQGGPWSPIEVEVIRPPTETRDSQSPCFNSKPEDDTWTATIPTNEPLVALGEGRFTCLETDADKGTVTPYKFKITLPKSDDYNQDTIKIFWIERLQLVPKLDTENGYPGFKEEFNAEAPKLMTDYENCMLNTMDLPEVGVIEKDCDAMTYSISSWFHQGAKSCECDQTGSISRSCDPSGGQCECREGVTGRTCNQCAAGFFGFSHTGCQMCDCNRRGTVNQGQFCEQQSGQCQCLEGVGGRQCDRCLPGFYDFPNCKKCECNGHANECDSVSGECLSCAHDTTGANCERCADGYYGDPTSVTNSQCTPCPCPDGPKSNRQFADTCGLSRMRGSSSREDDARGPRPSMVMCNCNPGYQGLQCDQCAPGHFGNPMEPFGSCNPCECNGNIDTSDPDACDARTGECLKCLYNRGGDDCSECADGYYEQPNADGTDFTCVPCGCDERGGDPFIGNTCDKKTGQCACLDKVEGRTCSSCRNNFFDLANAVENGGCQACGCDPENSEDISGEQPCDMVTGQCRCKPGFGGRDCKSCEQGYYGDPKIGKCEACDCDPSGVHDPFACNAWTGQCECKPGIGGQHCDRCERGFHGIAPDCEPCGECFDSWDGIIGELINETKTVLATVDNIRDNGVTGKDKKIFQR
Comments
Domain Eukaryota
Family Oikopleuridae
Species (Full Name) Oikopleura dioica (Tunicate)
Gene GSOID_T00019363001
PFAM codes  PF00053,  PF00055
InterPro codes  IPR000742,  IPR002049,  IPR008211,  IPR013015
PDB structures (whole Protein) -