E7FGC2F1

Structural maintenance of chromosomes protein
AF4
Categories voted by users:
Information
Protein name
Structural maintenance of chromosomes protein
Main knot
72 (60%)
Global pLDDT
81.88
Species
Danre
UniProt
Structure Prediction Model
AlphaFold v4:  E7FGC2
PDB structures
-
Model length
1289
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
82.1 39-1100 1062 1-38, 1101-1289 38 189
Model Sequence
MPVKTSKTAGRRAAEDSDEEVSKPRKAPSTAVQSSPPPALNDGAAGESAEVVDSRSLEEILGSIPPAPPPAMSSEPGAPRLMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDGHPDIQSCTVEVHFQKIIDKEGDDYDVIPDSSFYVARTAGKDNSSAYYINTKKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPINILCRRVEALNEQRGEKLNRVKMVEKEKSALEGEKNKAVDFLSLENDIFKKRNLLCHFYVHDLQSRVSVKEAEKQQIQEDTKDLSDKSSQLTEEMKSKNEDLKAVEKKLTKLTKYIESQKEKFTQLDLQDVEVREKLKHTKSKTKKLQKQLQKDQEKLEEVRGVPASSEKIITEASAQKEELEKKKLLEEQKLAEVMESLKEETKGLQEDKEKKEKELLELSKSVNETRSRMDVAQSELDIYLSQHNTAINQLNQAKSALQETVDTLRERRAAIKDLQVKIPAQEEQLKKDERELEQISEQDKQTRAQVGDMRQKVAEAKSSLSSNRSRSKVLDTLMQQKRSGKIPGILGRLGDLGAIDEKYDVAISSSCGSLDNILVDTIDTAQKCVTFLKAQNIGVATFIGLDKMKVWQQSMGSISTPENIPRLFDMVRVKDESVRPAFYFALRDTLVAKDLEQATRVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMKGRMGSSVCADVTQEQLDKMESALNKEVTQLQDCQKRKNQLEEKVHKARCELRDMKNTLEKYTATIQSLTEQELHLKPQIKDLEANVIAAAPDKAKQKQMEKSLEAYRKDFEAASNKAGKVEAEVKRLHTLIVDINSHKLKAQQDKLDQINTQLDQCSSAVTKAQVAIKTAGRNLKKSEDGVSRLEQEISENEKLMEELTEQLKKLEEQAGEIMQSYQQAEEALPEVQDQHRAVVQEIKALQEQEHALQKESLSVRLKVEHIDTAITECHNKIKHWQKEASKLCLHHIDGVPAEELPALNPDQLQDIGNPDVIKNEIALLEDRCANMKPNLGAIAEFKKKEELYLQRVAELDDITTQRDSFKRGCEDLRKQRLHEFMAGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGGEKTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEMADRLIGIYKTHNTTKNVAINPKTIILREIQTA
Comments
AF1-Unsure
Categories voted by users:
Information
Protein name
Structural maintenance of chromosomes protein
Main knot
72 (62%)
Knot fingerprint
K 72 52 72 72 52 31 41
Global pLDDT
81.88
Species
Danre
UniProt
Structure Prediction Model
AlphaFold v1:  E7FGC2
PDB structures
-
Model length
1289
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
83.7 237-1267 1031 1-236, 1268-1289 236 22 Knot
83.5 322-1268 947 1-321, 1269-1289 321 21 Slipknot
83.8 394-1267 874 1-393, 1268-1289 393 22 Slipknot
83.9 774-1271 498 1-773, 1272-1289 773 18 Slipknot
Model Sequence
MPVKTSKTAGRRAAEDSDEEVSKPRKAPSTAVQSSPPPALNDGAAGESAEVVDSRSLEEILGSIPPAPPPAMSSEPGAPRLMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDGHPDIQSCTVEVHFQKIIDKEGDDYDVIPDSSFYVARTAGKDNSSAYYINTKKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPINILCRRVEALNEQRGEKLNRVKMVEKEKSALEGEKNKAVDFLSLENDIFKKRNLLCHFYVHDLQSRVSVKEAEKQQIQEDTKDLSDKSSQLTEEMKSKNEDLKAVEKKLTKLTKYIESQKEKFTQLDLQDVEVREKLKHTKSKTKKLQKQLQKDQEKLEEVRGVPASSEKIITEASAQKEELEKKKLLEEQKLAEVMESLKEETKGLQEDKEKKEKELLELSKSVNETRSRMDVAQSELDIYLSQHNTAINQLNQAKSALQETVDTLRERRAAIKDLQVKIPAQEEQLKKDERELEQISEQDKQTRAQVGDMRQKVAEAKSSLSSNRSRSKVLDTLMQQKRSGKIPGILGRLGDLGAIDEKYDVAISSSCGSLDNILVDTIDTAQKCVTFLKAQNIGVATFIGLDKMKVWQQSMGSISTPENIPRLFDMVRVKDESVRPAFYFALRDTLVAKDLEQATRVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMKGRMGSSVCADVTQEQLDKMESALNKEVTQLQDCQKRKNQLEEKVHKARCELRDMKNTLEKYTATIQSLTEQELHLKPQIKDLEANVIAAAPDKAKQKQMEKSLEAYRKDFEAASNKAGKVEAEVKRLHTLIVDINSHKLKAQQDKLDQINTQLDQCSSAVTKAQVAIKTAGRNLKKSEDGVSRLEQEISENEKLMEELTEQLKKLEEQAGEIMQSYQQAEEALPEVQDQHRAVVQEIKALQEQEHALQKESLSVRLKVEHIDTAITECHNKIKHWQKEASKLCLHHIDGVPAEELPALNPDQLQDIGNPDVIKNEIALLEDRCANMKPNLGAIAEFKKKEELYLQRVAELDDITTQRDSFKRGCEDLRKQRLHEFMAGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGGEKTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEMADRLIGIYKTHNTTKNVAINPKTIILREIQTA
Comments
Domain Eukaryota
Family Danionidae
Species (Full Name) Danio rerio
PFAM codes  PF02463,  PF06470
InterPro codes  IPR003395,  IPR010935,  IPR024704,  IPR027417,  IPR036277
PDB structures (whole Protein) -
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