E9AH53F1

Ubiquitin carboxyl-terminal hydrolase
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (69%)
Global pLDDT
90.02
Species
Leiin
UniProt
Structure Prediction Model
AlphaFold v4:  E9AH53
PDB structures
-
Model length
307
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.7 10-225 216 1-9, 226-307 9 82
Model Sequence
MPSDESRWCLIESDPAVFREIIQTVGVKGVSVEDLIMLDSSMLEQYEHVYGLVLLFKWQSSEQASPLGTVVKDAPVFFAKQVIHNACATLAIINTLCNYPDQVELGPKVQRYLSFCQELDPEMRGSLLDSFDELREAHNSFAPHSAFTKDGPSPKDADVYHFASFVYRHGHIWELDGLQEGPLQCREATEANYREALVEVVQRRIDDIAAKDTTGAGQGISFSLMTIVDDPVTVLEKKIAALRAEEKPTTALDEELAEMLSLRKKDKEANVRRRHDYNAMIVALLKSLAERGKLEKIVAEVQAKASK
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (69%)
Knot fingerprint
K 52 31 31
Global pLDDT
90.02
Species
Leiin
UniProt
Structure Prediction Model
AlphaFold v1:  E9AH53
PDB structures
-
Model length
307
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.8 10-227 218 1-9, 228-307 9 80 Knot
88.7 9-163 155 1-8, 164-307 8 144 Slipknot
Model Sequence
MPSDESRWCLIESDPAVFREIIQTVGVKGVSVEDLIMLDSSMLEQYEHVYGLVLLFKWQSSEQASPLGTVVKDAPVFFAKQVIHNACATLAIINTLCNYPDQVELGPKVQRYLSFCQELDPEMRGSLLDSFDELREAHNSFAPHSAFTKDGPSPKDADVYHFASFVYRHGHIWELDGLQEGPLQCREATEANYREALVEVVQRRIDDIAAKDTTGAGQGISFSLMTIVDDPVTVLEKKIAALRAEEKPTTALDEELAEMLSLRKKDKEANVRRRHDYNAMIVALLKSLAERGKLEKIVAEVQAKASK
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (75%)
Global pLDDT
91.19
Species
Leiin
UniProt
Structure Prediction Model
PDB structures
-
Model length
307
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.1 9-225 217 1-8, 226-307 8 82
Model Sequence
MPSDESRWCLIESDPAVFREIIQTVGVKGVSVEDLIMLDSSMLEQYEHVYGLVLLFKWQSSEQASPLGTVVKDAPVFFAKQVIHNACATLAIINTLCNYPDQVELGPKVQRYLSFCQELDPEMRGSLLDSFDELREAHNSFAPHSAFTKDGPSPKDADVYHFASFVYRHGHIWELDGLQEGPLQCREATEANYREALVEVVQRRIDDIAAKDTTGAGQGISFSLMTIVDDPVTVLEKKIAALRAEEKPTTALDEELAEMLSLRKKDKEANVRRRHDYNAMIVALLKSLAERGKLEKIVAEVQAKASK
Comments
Domain Eukaryota
Family Trypanosomatidae
Species (Full Name) Leishmania infantum
PFAM codes  PF01088,  PF18031
InterPro codes  IPR001578,  IPR017390,  IPR036959,  IPR038765,  IPR041507
PDB structures (whole Protein) -
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