F0EVY5 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	GumN protein
Main knot	5₂ (54%)
Global pLDDT	83.52
Species	Kingella denitrificans
UniProt	F0EVY5
Structure Prediction Model	AlphaFold v4: F0EVY5
PDB structures	-
Model length	339
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.8	11-255	245	1-10, 256-339	10	84

Model Sequence

MLNYLKTWLFAAAAFCLTGYSVAETHGAAHQAASAQQASASQAASKAPSREEKSIIWRIRKDNQPTSYLVGTVHIGKQGSTLPPDFQYVLKQSRQLVLETQIADEEYAKAHPEEVVKMLQMMVHNKSLNETLGGKTTMIVRRIFRESAIPEFADLMGNPSSQYSLAPWAIWFHLGYTGTPPDYSTDYGVESLLLKQARTRKLPVLGLEDIEPLEMMRTIPDDVAVRNIEYLILRQDQMKQEQLELFQAYERRDADKLEELASDEESVSLVDPRDHEFMKRLNQQILGQRNRNWMPKLQQYLAQKPTLVAVGAAHLFGKDGLVALLRERGYTVEPFVMGK

Comments

ESM1

Categories voted by users:

Information

Protein name	GumN protein
Main knot	5₂ (51%)
Global pLDDT	86.29
Species	Kingella denitrificans
UniProt	F0EVY5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	339
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					60.7	11-261	251	1-10, 262-339	10	78

Model Sequence

Comments

Domain	Bacteria
Family	Neisseriaceae
Species (Full Name)	Kingella denitrificans ATCC 33394
Gene	HMPREF9098_0019
PFAM codes	PF01963
InterPro codes	IPR002816
PDB structures (whole Protein)	-

F0EVY5F1

AF4

Model Sequence

ESM1

Model Sequence