F0EZU7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	GumN protein
Main knot	6₂ (45%)
Global pLDDT	85.33
Species	Kingella denitrificans
UniProt	F0EZU7
Structure Prediction Model	AlphaFold v4: F0EZU7
PDB structures	-
Model length	343
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.0	9-286	278	1-8, 287-343	8	57

Model Sequence

MKRKFWSGFTSVMLAVAFLLQAGNLAWKMYQGKQPQAAIAPAKQYARVQMDWNAVKLESNVWKIHREGQADSYLLGTYHIGKKGDAMNPALKDLIARNQKIITEVVSEPPEAEIKNLAQNAMRSNVPLTEKMGRRPFDTLVRKMNTYPEGKSLSQNLKYVKPWAGVLFVMGLRDKDEDGNTGAESFIYRETARLGKEHGALETHTEATMYFALIPDDLAVAMLNDWVAHSEDSEESKALEAAYRQGEFSKMPALHTKMFSPDPDGKNTSLTLPQQEAVNEWFVQDLLIARNKNWLPKMKQEMAQQPTLFAVGAAHLMGSQGLIALLRQEGYTVTPEPGLKVWR

Comments

ESM1

Categories voted by users:

Information

Protein name	GumN protein
Main knot	6₂ (47%)
Global pLDDT	84.27
Species	Kingella denitrificans
UniProt	F0EZU7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	343
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					55.9	9-286	278	1-8, 287-343	8	57

Model Sequence

Comments

Domain	Bacteria
Family	Neisseriaceae
Species (Full Name)	Kingella denitrificans ATCC 33394
Gene	HMPREF9098_1381
PFAM codes	PF01963
InterPro codes	IPR002816
PDB structures (whole Protein)	-

F0EZU7F1

AF4

Model Sequence

ESM1

Model Sequence