| Protein name |
Polycystin 1-like 1, transient receptor potential channel-interacting
|
| Main knot |
Unknown (53%)
|
| Knot fingerprint |
S Unknown(x48) 31#41(x32) 76(x25) 41(x4)
|
| Global pLDDT |
61.1
|
| Species |
Rat
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v1:
 F1M1X0
|
| PDB structures |
-
|
| Model length |
2605
|
| AlphaFold deposition date |
2021-07-01
|
| AlphaKnot deposition date |
2021-12-18
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
63.2 | 750-2470 | 1721 | 1-749, 2471-2605 | 749 | 135 | Slipknot | |||||
 |
62.1 | 698-2454 | 1757 | 1-697, 2455-2605 | 697 | 151 | Slipknot | |||||
 |
63.5 | 357-2554 | 2198 | 1-356, 2555-2605 | 356 | 51 | Knot | |||||
 |
65.3 | 905-1893 | 989 | 1-904, 1894-2605 | 904 | 712 | Slipknot |
Model Sequence |
QASPEPCVSDAQDSCPSYAPKGTAGDPESQTPSSAAPWNKNILNTTSEGRLSFTNREPQTPPEWDEATNSFSDPPPGISQTRNLSASWYHPESSCPLTQHPLGAVLATQPENAGHFATCCFPETDAKAPPALGIRVHAASRTALCLLLDFGDNHGAEMKLSTVTGAATMTGYYQYRTEGVYKLKVVVSDCHGADEELGPYYMDIGHGNVSVFMNSSSIHNNESLAFANSLPQQEGTVVVHCFSSVSSYNVSFMSQTRVGSSQAWSGVTVGYTMQSVSVYTNGTVFAADTNITFVAVTEETVPLEFTWYFGENPPVTTTSRSIRRRLSIPQWYRVMVKATSRMGSVVSEPHLIRVQKRILANRLVSTASALVNANVSFECRLNFGTDVAYLWNFGDGSIELGSSSSGHVYDREGEFTVEVLAFNNISSATLRKQIFIVQEPCQPPPVKNMGPAKVQIWRSQPLRLGVTFEAAIICNISQGLSYTWSFVGAEATAVTLPAAVNTHRQTIMLPSYTLECGNYTAVAKVQIKGSMVYSNYCVGVEVRARAPVSVISEGTHIFLSKATSTSIILSGSQSYDPDNPGAALRYHWTCTAASSPIWPCFDDSTSYQMDTQAPAISFPAKWLSECCDQFLVTLTVSSSGRNSSQALTFLSTRPDLAFRFIHVSWVNFRDISVNWNEEVSLRAVCEDCGDVSDLTYSWDLFLVNATEKNAVEVPFCSTVGLLGASALGASLKSFESHQPSNVRASPTPHSLGPSPTPLGWTALSNLGSISAESPAGGHHIPAAGPVAGSGEPMEDYGSLSPAPSSLAEEALMMSDPEGSWPFPSSSTAFDDFEAYYSDIQEAVPSLGRQPGISANFQEAGSSLSAEESASYGDNLLGPFLHTGRAKPTLMIDWPKALVSRAVFHGYTTSGIMGPDVTIKPFSLSSGEMYVLQASVASKHVLLGKAQLYLTVNQAPQDMSCQVRPHRGMEAHTIFSIFCMSGKPDFHYEFRYRIGNASSHTLYRGQDTQYYFLLPAGDSSDSYKVIVSTEVTDGQGSKVQPCTVEVTVLPRYHGNDCHDKDLYNSTLENLSTLQLVGSYTEIRNYIAMITGILSRLYVESRNTSSCGQWSQIQDVLIFSACKVPYTDQETMMDSIHILRDLISFPNKLSLMSAELIYKYAQMFLAQGQVSRRLLVDEKLRVEFILLISGVWEAAKEDVRDGYYLQKEGMKIVSDMLLACLSLSPKHQIHISTGQMEFQTLVHRSPQSSIQNLGFIRVHLPNDVALHSPTQEETQSPCYISQLTFFMKSPYSGEQAPGQLGGVMSPWLYSCKSRRPILRGRLETPVTIEFGEEDHLHKKNPAMFVLLRDEVNVHQFTGLSENSQESLQIHIEFSKPVIRAFPIILLVRFSEKATPSDFLMKQVYFWDEQTVQMYVPAAPWRGANVGYLSLLDADYDRKPPNKYLAGAVNYTVHFQWIQCVFWDKTEWRSEGPCPQPGTSPEKVNCSYHRLAPFSVLRRKLNATFQVSSVSEFQSHPHNLLPSIFSVFFLVLYGFLMSKSSCVDCHKKKDPGCIFLEEEALLGHQLYAVVIDTGFRSPARFTSKVFIVLCGENGHSETKELCCPEKPLFGRNSRHTFILSTPHQLGPLQKIRLWHDSSGLSPSWFISHVMVKELCSGQAWFFSAQCWLAVSKRGGQVLGEFFCLSHGLSFWKLFYSKFTEYLEDFHIWFSLYSQPPSSNYLHTQRLAVSFCLLSVYSCLTALVTVGGHEQRPLGVGPTAITLDSFSLALLCTILACPPAQLLSLLFRCSKEARGHLRTSRQWPLRGVKTEVPQGPDPGGKPDSRQPSPHPISDLLPGTDQAWRMTASNSGIVHSSFPLEACRDKHLALRERSHCSPPSSQAPSSGFEELRPQQSRVCLLWSSSVAWAISGTASLACGLGTGFLGYKFVPAQCVWWLHLLLLSLVCCALITQPLMICLAASAFAWKRKHDSEFFTESLQDATKGLDLELEERSRTHIPLSPVSYSPDSAEEAERVLAARQRERHLRWAQTPSGPKFRVMRERLRRERLMQAALRDVTMHSVMLLLLLFIAYGRFCPGEYSLNQAIRRAFTRNAHHSLGDLSSTEDWWDWTLSTLLDGLHPERMPATAWGSQPGALGGQCHLIGPSVIKQLKVSAGTACVAPKPFSELVEDVLPMHSHALDLENRNVTPDDPKTCGVKKESYTHSLGRTRHEAHAALTALRASRWIDHSTRAVSVHFTLYNPPTRLFTSVTLGAEFLSTRGLVSSSLIESFSIFYRDSALQCLLMLSELLFLVLNMIHLCFQLWEMATKGILSYWRKPRQWLELSMVGVALAYCAASGHLTTLAENITDQFHKGLYQRFVDISLMVSWNQRARCLQGILLFLWMLKCVHLFSSLSTMAPFSAVTCSLLFRVLLVGALLLAAHSHLRWFLLYTSTLSRGTSAEAFPGLLLQFPGRSQKDSQHNHLESDHRAVNCYYGTLFLLLATLGFRMLRATSLTLFQDRKSFHRKSLVTLKDVAVSMWHRLLTFLRLETTTSGETEVTTDHIYYLDEFSSLLDELLMKIDGLSDSLELSILEKQWRRTVESRTGDSPSVGILEYQAAGCSTPLFLRSE
|
| Domain |
Eukaryota
|
| Family |
Muridae
|
| Species (Full Name) |
Rattus norvegicus
|
| PDB structures (whole Protein) |
-
|
F1M1X0