| Protein name |
tRNA-synt_2b domain-containing protein
|
| Main knot |
31 (51%)
|
| Global pLDDT |
95.26
|
| Species |
Ruminococcaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 F4XB71
|
| PDB structures |
-
|
| Model length |
172
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
97.2 | 3-103 | 101 | 1-2, 104-172 | 2 | 69 |
|
Model Sequence |
MELGLTFPLQRFLKVKTPEYGTESDRRFCWDLHVIDLRGHKSLLAVHCHSRYTFVRYDVSPFQWVDIPGLFREGLLDSLTAAGFSNEQAADYLRQAGTIEITRTHGRREVAFLNRAWEDVLALDLCLDTSNQTQPLLDHAVNTRPSRCVGHEGLGLGLERMALILTERNTKR
|
| Protein name |
tRNA-synt_2b domain-containing protein
|
| Main knot |
01 (49%)
|
| Species |
Ruminococcaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
172
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MELGLTFPLQRFLKVKTPEYGTESDRRFCWDLHVIDLRGHKSLLAVHCHSRYTFVRYDVSPFQWVDIPGLFREGLLDSLTAAGFSNEQAADYLRQAGTIEITRTHGRREVAFLNRAWEDVLALDLCLDTSNQTQPLLDHAVNTRPSRCVGHEGLGLGLERMALILTERNTKR
|
| Domain |
Bacteria
|
| Family |
Oscillospiraceae
|
| Species (Full Name) |
Ruminococcaceae bacterium D16
|
| Gene |
HMPREF0866_00544
|
| PDB structures (whole Protein) |
-
|
F4XB71