| Protein name |
Ribonucleoside-diphosphate reductase (EC 1.17.4.1)
|
| Main knot |
41 (63%)
|
| Global pLDDT |
80.29
|
| Species |
Thermoanaerobacterium xylanolyticum
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 F6BGC6
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 F6BGC6: L0
|
| Model length |
1180
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
82.4 | 22-680 | 659 | 1-21, 681-1180 | 21 | 500 |
|
Model Sequence |
MNLTENSKKVLERRYLAKDENGRVVETVEELFERVAKAISDVDKEYDINADTEKVKKKFYEMMTNLDFLPNSPTLMNAGRPLGQLSACFVLPVGDSMEEIFDAVKYAAIIHKSGGGTGFSFSRLRPKGATVRSTGGVASGPVSFMKVFNSATEAVKQGGTRRGANMGILRIDHPDILEFIQCKQDNNEITNFNISVGITEDFMKAVEKGQDYDLIDPHTNKVVKSLNAREVFKLIVEMAWKNGEPGIVFLDRINEKNPTPLVGEIESTNPCVTGDTWVSTEYGLMRIDEIYNKYQNGGLNIVTDNRVPMTQYQVVNGGYITEAVPDLNSEGTSLNMISKVYNNGEKDVIKLTLKSGYEIKATPDHRFLTSKGWKELSRIKIGDEILIQSGDGFFSNVYELPFKVDNIYTGNNGRTYTLNLPNKWSKELGQTLGWLIGDGWLRDGDKDTRVGFTFGNDDVEVMYHLKPFINNIYGKDVKEVKRENGVYHLSYHSKYLVEFFKKLGVKNVKAENKQVPQSIYKAPYEAVVGFLQALFTADGSVRDNPKSNSSWVVLTSKSKRLLQDVQILLINLGMKSVIFDRSRKPRKATFKYTSVNGEEKFYSTDGILYELGIFGKSRDKFAKEIGFMSEKKQKALSNIKYKSFYKTKFYDEVAAIEKIGKEVVYDLTEPVTHSMICNGIVVHQCGEQPLLPYESCNLGSINLKNMLKEENGKYEVDYGKLRDTVHNAVHFLDNVIDANKYPLQQIDEMTKGTRKIGLGVMGFADMLLMLNIPYNSEEAVEFADKLMKFIDEESKAASMELAEKRGVFKYYDKSIYKDKNIRLRNATTTTIAPTGTISIIAGTSSGIEPLFAIAMTRNVMDNTQLVEVNPVFKEVALKRGFYSEELMKKIAQQGTLKGIDGIPDDVKRVFVTAHDIDPVWHIRMQSAFQKHVDNAVSKTVNFRHDATVDDVREVYELAYKLGLKGVTIYRDGSRDSQVLNLGIKKVEKEGVKEDKQEGRNQIVPRPRPSVTKGITEKVRIGCGNLYITVNYDDKGICEVFTNLGRAGGCPSQSEATSRLISIALRSGLDAKSIVEQLKGIRCHSTLRQMANNKEIKVLSCPDAIAKVIEKVMKLKVEEDESFAPIDVPINGSSHKNDDAALQAAYTYDTQEERFCPECGSEIEHEGGCVVCKNCGYSKCG
|
| Domain |
Bacteria
|
| Family |
Thermoanaerobacterales Family III. Incertae Sedis
|
| Species (Full Name) |
Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)
|
| Gene |
Thexy_0288
|
| PFAM codes |
PF00317, PF02867, PF12637, PF14528
|
| InterPro codes |
 IPR000788, IPR003586, IPR003587, IPR004042, IPR004860, IPR006141, IPR006142, IPR008926, IPR013344, IPR013509, IPR024434, IPR027434, IPR030934, IPR036844
|
| PDB structures (whole Protein) |
-
|
F6BGC6