F6HHP7F1

Phytochrome
AF4
Categories voted by users:
Information
Protein name
Phytochrome
Main knot
41 (81%)
Global pLDDT
75.89
Species
Grape
UniProt
Structure Prediction Model
AlphaFold v4:  F6HHP7
PDB structures
-
Model length
1118
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
81.8 81-381 301 1-80, 382-1118 80 737
Model Sequence
MSSKSTNKTNCSRSSSARSKHGARVVAQTPIDAQLHVNFEESERHFDYSASVDFNISSSTSDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQQEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILHRIDVGLIIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYDRVMVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKVIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESEQQKGRKLWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCDMLLRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEYHSGSTGLSTDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDKSADDSKMIVNVPSVDASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIGMPLINLVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACCSRDIKDNVVGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLEWNDAMQNLSGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKLLFGFFDQHGKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSLKKLAYIRQQIRKPLNGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIEECYMELNSGEFNLGEVLEVVISQAMILSRERRVEIIYDSPAEVSSMLLYGDNLRLQQVLSDFLTNALLFTPAFEGSSVALRVIPRRECIGTKVHIVHLEFRIAHPAPGIPEDLIQQMFHHSQGVSREGLGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPLAH
Comments
Domain Eukaryota
Family Vitaceae
Species (Full Name) Vitis vinifera (Grape)
Gene VIT_12s0057g00980
PFAM codes  PF00360,  PF00989,  PF01590,  PF02518,  PF08446
InterPro codes  IPR000014,  IPR000700,  IPR001294,  IPR003018,  IPR003594,  IPR003661,  IPR005467,  IPR012129,  IPR013515,  IPR013516,  IPR013654,  IPR013767,  IPR016132,  IPR029016,  IPR035965,  IPR036890,  IPR043150,  IPR044767
PDB structures (whole Protein) -