F8XR80 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Amino acid permease family protein
Main knot	4₁ (60%)
Global pLDDT	89.89
Species	Acidithiobacillus sp
UniProt	F8XR80
Structure Prediction Model	AlphaFold v4: F8XR80
PDB structures	-
Model length	274
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.7	24-255	232	1-23, 256-274	23	19

Model Sequence

MSAESRQTLHKTFQLVDLSSLSISSVGPIFSVAAAGSAMVQAAGAEVPLAIVLIAIPFILCSWIFLSLNQHFPNAGASYHWSRRIMGIDYSNFQAWIVIMAYFWSIPPILIPAARFTLEALGVPHPGAGLQIVVATFWALFAAGVLLLGARITARVTQIFLLIEIVSVAFMAIVGYSHWGPPAVGAGSFSLSHVHWAGVIVCMVVAATIVDGWEIDSYASEESRKPRVTPGWGGIIGAVSVVLYYLLIWPLLLHQVPLDQLQNTSDTLSLWAAT

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease family protein
Main knot	4₁ (57%)
Global pLDDT	92.27
Species	Acidithiobacillus sp
UniProt	F8XR80
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	274
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.3	26-254	229	1-25, 255-274	25	20

Model Sequence

Comments

Domain	Bacteria
Family	Acidithiobacillaceae
Species (Full Name)	Acidithiobacillus sp. GGI-221
Gene	GGI1_11653
PFAM codes	PF00324
InterPro codes	IPR004841
PDB structures (whole Protein)	-

F8XR80F1

AF4

Model Sequence

ESM1

Model Sequence