G1L2L2 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (97%)
Global pLDDT	73.81
Species	Giant panda
UniProt	G1L2L2
Structure Prediction Model	AlphaFold v4: G1L2L2
PDB structures	-
Model length	339
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.6	185-231	47	1-184, 232-339	184	108

Model Sequence

MSSEMLPAFIESSNVERKQSLSEDQEKSQKPRLGEGFEPISKRQMKKLIKQKQWEEQRELRKQKRKEKRKRKQLERQCQLESNSDGNDRKRIRRDVVHSTLRLIIDCSFDSLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTSHGGQLKKNMDENDKGWVNWKDIHIKPEHYSEFIKKEDLIYLTSDSPNVLKELDESKAYVIGGLVDHNHHKGLTYKQASDHGIGHAQLPLGNFVKMNSRKVLAINHVFEIILEYLETRDWQEAFFTILPQRKGAVPTDKACESSSHDKKSARVEDGLDSDSSEEENSRNEPESPHEEEKQDKENSNESTVNSIPH

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (95%)
Global pLDDT	83.44
Species	Giant panda
UniProt	G1L2L2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	339
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					62.6	185-231	47	1-184, 232-339	184	108

Model Sequence

Comments

Domain	Eukaryota
Family	Ursidae
Species (Full Name)	Ailuropoda melanoleuca (Giant panda)
Gene	TRMT10A
PFAM codes	PF01746
InterPro codes	IPR007356, IPR016009, IPR016653, IPR028564, IPR038459
PDB structures (whole Protein)	-

G1L2L2F1

AF4

Model Sequence

ESM1

Model Sequence