G2DDP7F1

Putative sodium symporter protein
AF4
Categories voted by users:
Information
Protein name
Putative sodium symporter protein
Main knot
41 (74%)
Global pLDDT
88.41
Species
vent Ph05
UniProt
Structure Prediction Model
AlphaFold v4:  G2DDP7
PDB structures
-
Model length
367
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.4 51-301 251 1-50, 302-367 50 66
Model Sequence
MDLQTLTYTVVGFTFALYIGIAFWARASTTGEFYAAGRGVHPVANGMATAADWMSAASFISMAGLIAFNGYGASVFLMGWTGGYVLLALLLAPYLRKFGKFTVPEFIGDRYYSRTARIVAVICLILASITYVIGQMKGIGVAFSRFLETDYDTGLYIGMGIVFIYAVLGGMKGITYTQIAQYCVLIFAYTVPAVFISMNITGNPLPQLGIGSTMADGSGMYMLDKLDLVVTELGFKEYTSQVMGSKLNMFVYTLSLMIGTAGLPHVIIRFFTVPKVKDARSSAGWALVFIAILYTTAPAVGSMARLNLMNTIQMGEVGSAEGNLAYAERPQWFKNWEQTGLLKYEDKNGDGRIQYYNDKNAEFAAKA
Comments
ESM1
Categories voted by users:
Information
Protein name
Putative sodium symporter protein
Main knot
41 (66%)
Global pLDDT
79.98
Species
vent Ph05
UniProt
Structure Prediction Model
PDB structures
-
Model length
367
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.2 50-297 248 1-49, 298-367 49 70
Model Sequence
MDLQTLTYTVVGFTFALYIGIAFWARASTTGEFYAAGRGVHPVANGMATAADWMSAASFISMAGLIAFNGYGASVFLMGWTGGYVLLALLLAPYLRKFGKFTVPEFIGDRYYSRTARIVAVICLILASITYVIGQMKGIGVAFSRFLETDYDTGLYIGMGIVFIYAVLGGMKGITYTQIAQYCVLIFAYTVPAVFISMNITGNPLPQLGIGSTMADGSGMYMLDKLDLVVTELGFKEYTSQVMGSKLNMFVYTLSLMIGTAGLPHVIIRFFTVPKVKDARSSAGWALVFIAILYTTAPAVGSMARLNLMNTIQMGEVGSAEGNLAYAERPQWFKNWEQTGLLKYEDKNGDGRIQYYNDKNAEFAAKA
Comments
Domain Bacteria
Family sulfur-oxidizing symbionts
Species (Full Name) endosymbiont of Riftia pachyptila (vent Ph05)
Gene Rifp1Sym_bp00240
PFAM codes  PF00474
InterPro codes  IPR001734,  IPR019899,  IPR038377
PDB structures (whole Protein) -
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