G5GC51 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	TraB/GumN family protein
Main knot	5₂ (43%)
Global pLDDT	83.87
Species	Alloprevotella rava
UniProt	G5GC51
Structure Prediction Model	AlphaFold v4: G5GC51
PDB structures	-
Model length	363
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.5	15-302	288	1-14, 303-363	14	61

Model Sequence

MIKKILWGSGMIRAVIILMLEIIGISGVSAQTAKNDTIPSALMYRISGNGLTTPSYIFGSMHIIPHEFVNRSQKFMDIAHNVQRIVTEIDHRQSKLFNDSNIASAKALAEQMLPHLVLPADSQMQVIAPEKFHTVDSLLHRYRLVKTLVPNDTCWWRYEPGVFTAAATQITMGMYITLGQEYVRVKPEQTSAMIDEYMSILADSLQKEYAQLESLEYQKSLLPQLIIDYRKMKIDSTFINNLCRGIASMGDIHNRANMLYEVMTSLDNAMVYGHQMMDAYMKQDGQRTAQVLMVANQQAGQQTGEQIALRERNDRWMKVIPSMLKEKSNLFVVGLFHLTSTDNGPGIVEMLKKAGYTIEPVRI

Comments

ESM1

Categories voted by users:

Information

Protein name	TraB/GumN family protein
Main knot	5₂ (42%)
Global pLDDT	82.08
Species	Alloprevotella rava
UniProt	G5GC51
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	363
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					56.6	15-302	288	1-14, 303-363	14	61

Model Sequence

Comments

Domain	Bacteria
Family	Prevotellaceae
Species (Full Name)	Alloprevotella rava F0323
Gene	HMPREF9332_01152
PFAM codes	PF01963
InterPro codes	IPR002816
PDB structures (whole Protein)	-

G5GC51F1

AF4

Model Sequence

ESM1

Model Sequence