| Protein name |
AraC family transcriptional regulator
|
| Main knot |
31 (49%)
|
| Global pLDDT |
96.62
|
| Species |
[Clostridium] citroniae
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 G5HFL2
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 G5HFL2: L+1N
|
| Model length |
174
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
97.6 | 2-102 | 101 | 1-1, 103-174 | 1 | 72 |
|
Model Sequence |
MELGLTIPLQTYLKIKQLEDRTQKDLFFCWELHRIQLQSRDTLVAVNSSNRLAVVMSGMDGAAWRDFPLIFTQGLRQVLGAEGYRSCQIEAYLSQAGPLKLTRTHGRRSVAGLNRMDDCLWSVPVLVDETRLFQQVHCMEANRQRCRMAGHEGYQEPSYCWEIDMDARQLLHIC
|
| Protein name |
AraC family transcriptional regulator
|
| Main knot |
31 (45%)
|
| Global pLDDT |
77.54
|
| Species |
[Clostridium] citroniae
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
G5HFL2: L+1N
|
| Model length |
174
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
85.1 | 2-102 | 101 | 1-1, 103-174 | 1 | 72 |
|
Model Sequence |
MELGLTIPLQTYLKIKQLEDRTQKDLFFCWELHRIQLQSRDTLVAVNSSNRLAVVMSGMDGAAWRDFPLIFTQGLRQVLGAEGYRSCQIEAYLSQAGPLKLTRTHGRRSVAGLNRMDDCLWSVPVLVDETRLFQQVHCMEANRQRCRMAGHEGYQEPSYCWEIDMDARQLLHIC
|
| Domain |
Bacteria
|
| Family |
Lachnospiraceae
|
| Species (Full Name) |
[Clostridium] citroniae WAL-17108
|
| Gene |
HMPREF9469_01374
|
| PDB structures (whole Protein) |
-
|
G5HFL2