G5R7X8 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Putative transport protein yifK
Main knot	4₁ (57%)
Global pLDDT	81.06
Species	Salmonella enterica subsp
UniProt	G5R7X8
Structure Prediction Model	AlphaFold v4: G5R7X8
PDB structures	-
Model length	284
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.0	25-255	231	1-24, 256-284	24	29

Model Sequence

MAEKKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIIIGLGVIFFGFGNGGQAIGFGNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAA

Comments

ESM1

Categories voted by users:

Information

Protein name	Putative transport protein yifK
Main knot	4₁ (64%)
Global pLDDT	89.47
Species	Salmonella enterica subsp
UniProt	G5R7X8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	284
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.8	26-255	230	1-25, 256-284	25	29

Model Sequence

Comments

Domain	Bacteria
Family	Enterobacteriaceae
Species (Full Name)	Salmonella enterica subsp. enterica serovar Senftenberg str. A4-543
Gene	LTSESEN_5861
PFAM codes	PF00324
InterPro codes	IPR004840, IPR004841
PDB structures (whole Protein)	-

G5R7X8F1

AF4

Model Sequence

ESM1

Model Sequence