G9XP43 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Spore germination protein
Main knot	3₁ (48%)
Global pLDDT	89.47
Species	Desulfitobacterium hafniense
UniProt	G9XP43
Structure Prediction Model	AlphaFold v4: G9XP43
PDB structures	-
Model length	345
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.6	13-255	243	1-12, 256-345	12	90

Model Sequence

MPNLIIRDLGQDFWQAILVAIVMETMLGFFLYKMGRAYANQTIFQYSEKILGRFLGKLSTSIFSLYLISVAIALTQILMEFFGSMVMPQTPRYVFAILLLLVSTYACSAGLEVIMRLSEIVAPFVLGSFLFIMLFNIGNMEFDNLRPMFQHSLGEVLRGAMLPTAWFGICIIMGVLMAYHNNPKDMYKIKLMGVGLGILTITTSMFFVITVIGVEMGSRQLYSVYILARLVDVGNFIQRMEAFQIVSWTAGSFLILALFHYAGVEGLKHIFPKKSRMFLGISVAIIVFVVSVFVTPTTIDRSTFLKNILGIYGLVVEICGVSLLFIIYIIKQKFKAVKKRSSNEQ

Comments

ESM1

Categories voted by users:

Information

Protein name	Spore germination protein
Main knot	3₁ (44%)
Global pLDDT	94.73
Species	Desulfitobacterium hafniense
UniProt	G9XP43
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	345
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.6	1-345	345		0	0

Model Sequence

Comments

Domain	Bacteria
Family	Desulfitobacteriaceae
Species (Full Name)	Desulfitobacterium hafniense DP7
Gene	HMPREF0322_02738
PFAM codes	PF03845
InterPro codes	IPR004761
PDB structures (whole Protein)	-

G9XP43F1

AF4

Model Sequence

ESM1

Model Sequence