H0S9R9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Putative integral membrane protein
Main knot	3₁ (48%)
Global pLDDT	83.42
Species	strain ORS 375
UniProt	H0S9R9
Structure Prediction Model	AlphaFold v4: H0S9R9
PDB structures	-
Model length	336
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.5	25-219	195	1-24, 220-336	24	117

Model Sequence

MPTLESNRLVFRFPHIEESAQFSIEFQRTLRIPDTDRTYSLPPGLGLFPLRHVEDFADRLDHATISRGGVVMPMWQAEAMWLNFHSRRPYDGPSFPVAIKVAAGKINAVSGETWRPGLNRHPQDYMVSPQQPWLDGFAVKPGVIRQFVAMPLGDGYTVEHQISGTEEWGGLQIQVAPLKNHAWQKIRAAWREKVRTPHFAEDRLCDSSSRLMGLGAGGLMKQAIYPDQFQLDDWDLESMDRVFVTLLHARDWKSTTGESAPHHPPTAQEYSKAGLPWFDYYGCDQASLPGGEKLASIASVGELFKKKTGAAMPNCEDVETGVPKIVGPRQVRVGEW

Comments

ESM1

Categories voted by users:

Information

Protein name	Putative integral membrane protein
Main knot	5₂ (61%)
Global pLDDT	71.7
Species	strain ORS 375
UniProt	H0S9R9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	336
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.8	26-263	238	1-25, 264-336	25	73

Model Sequence

Comments

Domain	Bacteria
Family	Nitrobacteraceae
Species (Full Name)	Bradyrhizobium sp. (strain ORS 375)
Gene	BRAO375_1270023
PDB structures (whole Protein)	-

H0S9R9F1

AF4

Model Sequence

ESM1

Model Sequence